Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G064500 Glycine max HOM05D001921 ORTHO05D001784 1.2e-83 313.2 161 100.0
Glyma.04G063200 Glycine max HOM05D001921 ORTHO05D001784 4.8e-56 221.5 172 73.3
VMungo1309G2915 Vigna mungo HOM05D001921 ORTHO05D001784 6.7e-42 174.5 176 61.4
Phvul.009G089600 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 5.5e-36 154.8 186 52.7
Lalb_Chr08g0244291 Lupinus albus HOM05D001921 ORTHO05D001784 3.2e-20 102.4 159 45.3
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 3.7e-16 89.0 181 38.7
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 1.8e-15 86.7 187 40.6
arahy.Tifrunner.gnm1.ann1.016HCI Arachis hypogaea HOM05D054817 ORTHO05D001784 3.1e-15 85.9 163 42.3
arahy.Tifrunner.gnm1.ann1.0A2U5U Arachis hypogaea HOM05D054817 ORTHO05D001784 3.1e-15 85.9 163 42.9
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 5.3e-15 85.1 186 39.2
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 9.1e-15 84.3 176 39.8
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 9.1e-15 84.3 187 40.1
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-14 82.8 172 39.5
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-14 82.8 172 39.5
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.6e-14 82.8 188 39.4
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 5.9e-14 81.6 192 37.5
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 7.7e-14 81.3 192 37.5
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 7.7e-14 81.3 188 42.0
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.2e-13 79.7 188 38.8
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 2.2e-13 79.7 160 36.9
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.0e-13 78.6 184 37.0
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 5.0e-13 78.6 183 39.3
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 6.5e-13 78.2 177 40.1
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 6.5e-13 78.2 188 37.8
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.1e-12 77.4 175 36.6
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 2.5e-12 76.3 179 36.9
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.2e-12 75.9 172 40.7
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.2e-12 75.5 188 41.0
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 7.2e-12 74.7 189 39.7
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 9.4e-12 74.3 187 38.5
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.2e-11 73.9 166 39.2
MD15G1131400 Malus domestica HOM05D001921 ORTHO05D001784 1.2e-11 73.9 195 32.3
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.6e-11 73.6 194 34.5
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 2.7e-11 72.8 167 38.3
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 2.7e-11 72.8 186 38.2
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 6.1e-11 71.6 159 40.3
Haze_21453 Corylus avellana HOM05D001921 ORTHO05D001784 8.0e-11 71.2 173 39.9
DCAR_017895 Daucus carota HOM05D001921 ORTHO05D001784 8.0e-11 71.2 112 44.6
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 1.0e-10 70.9 184 39.7
Eucgr.C02723 Eucalyptus grandis HOM05D001921 ORTHO05D001784 1.4e-10 70.5 184 32.1
Thhalv10026353m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 1.4e-10 70.5 184 37.5
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 1.4e-10 70.5 203 32.5
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.4e-10 70.5 119 40.3
FAN20G2754 Fragaria x ananassa HOM05D014836 ORTHO05D017926 2.3e-10 69.7 177 36.7
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 3.9e-10 68.9 177 36.2
FAN27G2046 Fragaria x ananassa HOM05D014836 ORTHO05D017926 3.9e-10 68.9 174 36.2
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 5.2e-10 68.6 198 35.9
CARHR239920 Cardamine hirsuta HOM05D001921 ORTHO05D001784 6.7e-10 68.2 191 36.1
DCAR_014829 Daucus carota HOM05D001921 ORTHO05D001784 1.1e-09 67.4 155 39.4
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 2.0e-09 66.6 184 34.8
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 2.0e-09 66.6 182 34.1
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 3.3e-09 65.9 183 37.2
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 3.3e-09 65.9 195 35.4
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.3e-09 65.9 180 33.9
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 3.3e-09 65.9 205 32.7
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.3e-09 65.9 205 32.7
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 4.4e-09 65.5 177 35.0
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 4.4e-09 65.5 177 35.0
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 4.4e-09 65.5 157 36.3
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 4.4e-09 65.5 145 37.9
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 5.7e-09 65.1 183 37.7
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.7e-09 65.1 181 34.3
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.4e-09 64.7 203 33.0
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.4e-09 64.7 204 33.3
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.4e-09 64.7 205 32.7
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 7.4e-09 64.7 124 41.1
THA.LOC104804502 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 7.4e-09 64.7 168 33.9
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 1.3e-08 63.9 168 35.1
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.7e-08 63.5 134 39.6
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.2e-08 63.2 161 35.4
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 2.8e-08 62.8 175 33.7
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 3.7e-08 62.4 134 40.3
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 3.7e-08 62.4 184 34.2
AT2G25250 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 4.8e-08 62.0 168 33.3
BraA03t15157Z Brassica rapa HOM05D001921 ORTHO05D001784 6.3e-08 61.6 182 35.7
A01p06280 Brassica napus HOM05D001921 ORTHO05D001784 8.2e-08 61.2 200 32.0
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 8.2e-08 61.2 182 35.2
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 8.2e-08 61.2 179 34.1
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 1.1e-07 60.8 184 34.2
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.1e-07 60.8 178 34.3
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.4e-07 60.5 195 34.9
PGR044G0696 Punica granatum HOM05D001921 ORTHO05D001784 1.8e-07 60.1 205 28.8
C07p59050 Brassica napus HOM05D001921 ORTHO05D001784 2.4e-07 59.7 185 36.2
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.4e-07 59.7 181 34.8
CsaV3_2G003470 Cucumis sativus L. HOM05D001921 ORTHO05D001784 2.4e-07 59.7 119 39.5
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 2.4e-07 59.7 145 38.6
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 2.4e-07 59.7 181 35.4
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 2.4e-07 59.7 181 35.4
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 2.4e-07 59.7 119 42.0
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 3.1e-07 59.3 195 33.8
Sp7g29820 Schrenkiella parvula HOM05D001921 ORTHO05D001784 3.1e-07 59.3 197 33.0
BolC7t46353H Brassica oleracea HOM05D001921 ORTHO05D001784 5.3e-07 58.5 188 35.6
Hma1.2p1_0228F.1_g096620 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 5.3e-07 58.5 140 38.6
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 7.0e-07 58.2 206 32.5
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 7.0e-07 58.2 174 36.2
BcaNung03129 Brassica carinata HOM05D001921 ORTHO05D001784 9.1e-07 57.8 168 34.5
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 9.1e-07 57.8 153 34.6
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 9.1e-07 57.8 174 36.2
Aa31LG2G18040 Aethionema arabicum HOM05D001921 ORTHO05D001784 1.2e-06 57.4 190 31.6
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 1.2e-06 57.4 196 32.7
AUR62031574 Chenopodium quinoa HOM05D000017 ORTHO05D000013 1.6e-06 57.0 110 40.0
Lalb_Chr07g0179601 Lupinus albus HOM05D001921 ORTHO05D001784 1.6e-06 57.0 133 40.6
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.6e-06 57.0 186 34.4
Haze_01021 Corylus avellana HOM05D001921 ORTHO05D001784 2.0e-06 56.6 201 32.3
Oeu030377.1 Olea europaea HOM05D001921 ORTHO05D001784 2.0e-06 56.6 184 32.6
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 3.5e-06 55.8 139 36.0
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 4.5e-06 55.5 215 34.0
Actinidia38704 Actinidia chinensis HOM05D001921 ORTHO05D001784 5.9e-06 55.1 148 35.1
Ah.16g104850 Amaranthus hybridus HOM05D001921 ORTHO05D001784 5.9e-06 55.1 111 41.4
Manes.03G011300 Manihot esculenta HOM05D001921 ORTHO05D001784 5.9e-06 55.1 185 34.1
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 7.7e-06 54.7 122 38.5
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 7.7e-06 54.7 192 35.9


User provided reference genes

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