Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G054900 Glycine max HOM05D004557 ORTHO05D005258 5.1e-51 204.1 105 100.0
Glyma.04G054800 Glycine max HOM05D004557 ORTHO05D005258 6.1e-44 180.6 101 90.1
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 3.6e-20 101.7 101 48.5
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 6.1e-20 100.9 101 48.5
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 6.1e-20 100.9 101 48.5
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 6.1e-20 100.9 101 48.5
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 9.8e-18 93.6 101 47.5
Phvul.009G080800 Phaseolus vulgaris HOM05D004557 ORTHO05D005258 6.3e-17 90.9 101 45.5
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 2.3e-11 72.4 94 36.2
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 6.8e-11 70.9 94 36.2
Thhalv10013525m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 9.8e-10 67.0 89 34.8
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 1.3e-09 66.6 94 37.2
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 4.9e-09 64.7 94 34.0
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 8.3e-09 63.9 95 32.6
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 1.4e-08 63.2 96 35.4
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 4.1e-08 61.6 97 34.0
C09p60890 Brassica napus HOM05D004557 ORTHO05D005258 4.1e-08 61.6 86 31.4
BolC9t58932H Brassica oleracea HOM05D004557 ORTHO05D005258 4.1e-08 61.6 86 31.4
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 4.1e-08 61.6 88 37.5
A10p22940 Brassica napus HOM05D004557 ORTHO05D005258 5.4e-08 61.2 86 31.4
BraA10t44362Z Brassica rapa HOM05D004557 ORTHO05D005258 5.4e-08 61.2 86 31.4
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.4e-08 61.2 90 33.3
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 5.4e-08 61.2 94 31.9
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea HOM05D004557 ORTHO05D005258 9.2e-08 60.5 97 33.0
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 9.2e-08 60.5 85 35.3
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 1.2e-07 60.1 91 33.0
MELO3C016901.2 Cucumis melo HOM05D004557 ORTHO05D005258 1.6e-07 59.7 91 33.0
Medtr3g465110 Medicago truncatula HOM05D004557 ORTHO05D005258 1.6e-07 59.7 93 33.3
AT5G16100 Arabidopsis thaliana HOM05D004557 ORTHO05D005258 2.0e-07 59.3 89 30.3
CsaV3_4G035930 Cucumis sativus L. HOM05D004557 ORTHO05D005258 2.0e-07 59.3 91 33.0
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 3.5e-07 58.5 94 35.1
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 4.5e-07 58.2 90 31.1
AL6G26980 Arabidopsis lyrata HOM05D004557 ORTHO05D005258 5.9e-07 57.8 89 29.2
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.9e-07 57.8 90 31.1
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.9e-07 57.8 90 31.1
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 5.9e-07 57.8 90 31.1
Thhalv10009656m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 7.7e-07 57.4 80 31.2
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 7.7e-07 57.4 93 31.2
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 7.7e-07 57.4 93 31.2
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 1.0e-06 57.0 90 30.0
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 2.3e-06 55.8 91 30.8
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 2.9e-06 55.5 88 30.7
Carub.0008s1244 Capsella rubella HOM05D004557 ORTHO05D005258 5.0e-06 54.7 86 29.1
CARHR197210 Cardamine hirsuta HOM05D004557 ORTHO05D005258 5.0e-06 54.7 89 24.7
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 5.0e-06 54.7 89 30.3
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 6.6e-06 54.3 85 34.1


User provided reference genes

Program Settings