Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 1.6e-155 552.7 280 100.0
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.4e-124 449.9 270 84.8
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.9e-124 449.5 270 83.7
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 3.9e-122 441.8 268 81.3
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.4e-119 433.3 268 82.8
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 4.0e-119 431.8 268 82.5
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.7e-117 426.4 265 79.6
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.2e-115 420.2 261 79.7
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 6.7e-114 414.5 270 76.3
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.1e-113 413.7 257 80.2
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 1.6e-107 393.3 258 75.2
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 8.2e-104 380.9 262 72.9
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 6.5e-101 371.3 265 70.2
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 8.4e-101 370.9 258 70.5
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 4.2e-100 368.6 262 71.0
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 2.7e-99 365.9 265 69.8
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 3.5e-99 365.5 263 69.2
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.5e-99 365.5 263 69.2
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 6.1e-99 364.8 254 72.0
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.8e-98 363.2 293 63.5
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 3.0e-98 362.5 266 67.7
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 6.7e-98 361.3 265 68.3
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.2e-96 356.3 276 67.8
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 2.2e-96 356.3 265 67.5
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 4.8e-96 355.1 266 67.3
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 8.2e-96 354.4 261 67.0
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 1.1e-95 354.0 252 68.3
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.8e-95 353.2 261 66.7
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 4.1e-95 352.1 252 68.3
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 9.0e-95 350.9 268 65.3
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.2e-94 350.5 272 64.7
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.5e-94 350.1 265 66.8
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.5e-94 350.1 264 65.9
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 2.6e-94 349.4 265 67.9
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 5.9e-94 348.2 264 65.5
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.3e-93 347.1 262 67.2
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 2.9e-93 345.9 291 61.2
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 3.8e-93 345.5 262 66.4
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-92 344.0 267 65.5
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.1e-92 344.0 265 67.2
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.4e-92 343.6 271 63.5
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.2e-92 342.4 267 65.2
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 7.2e-92 341.3 268 65.7
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.6e-91 340.1 270 67.4
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 2.7e-91 339.3 246 69.1
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 6.1e-91 338.2 270 67.0
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 6.1e-91 338.2 264 66.3
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 6.1e-91 338.2 263 66.2
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 1.0e-90 337.4 253 69.6
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.0e-90 335.9 253 69.6
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.9e-90 335.5 253 69.2
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 3.9e-90 335.5 268 64.2
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.9e-90 335.5 244 68.9
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 5.1e-90 335.1 263 65.8
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 6.7e-90 334.7 269 66.5
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.1e-89 334.0 262 63.0
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.5e-89 333.6 252 66.3
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 2.5e-89 332.8 252 65.1
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 2.5e-89 332.8 252 65.1
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 3.3e-89 332.4 288 60.4
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 4.3e-89 332.0 252 65.1
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 4.3e-89 332.0 264 64.4
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 7.4e-89 331.3 252 65.1
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.7e-88 330.1 253 66.4
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 2.2e-88 329.7 261 62.8
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 4.8e-88 328.6 252 65.1
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 1.1e-87 327.4 251 65.7
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 1.8e-87 326.6 251 64.9
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 2.4e-87 326.2 261 62.5
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 2.4e-87 326.2 238 66.4
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.3e-87 325.1 245 66.5
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 2.0e-86 323.2 249 65.1
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.4e-86 322.4 268 62.3
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.4e-86 322.4 267 63.3
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 4.5e-86 322.0 259 61.4
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.7e-85 320.1 269 61.3
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 2.2e-85 319.7 249 64.7
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.2e-85 319.7 256 62.1
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.8e-85 318.9 252 62.7
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.1e-84 317.4 247 63.2
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.1e-84 317.4 259 60.6
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.9e-84 316.6 270 61.1
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 3.2e-84 315.8 265 64.2
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 3.6e-83 312.4 244 66.0
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 1.8e-82 310.1 259 62.2
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.8e-82 310.1 266 60.2
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 3.9e-82 308.9 257 60.3
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 8.8e-82 307.8 252 61.9
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 3.3e-81 305.8 242 63.2
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 4.4e-81 305.4 258 60.5
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 2.4e-79 299.7 258 58.1
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.6e-78 296.2 291 54.6
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.2e-77 293.1 238 59.2
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.7e-75 285.4 229 64.6
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 1.4e-74 283.9 279 53.0
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 1.8e-74 283.5 254 56.7
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 5.2e-74 282.0 231 61.9
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 4.4e-73 278.9 247 59.1
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 2.8e-72 276.2 248 58.9
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 2.6e-70 269.6 278 52.9
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 4.5e-70 268.9 237 59.9
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.0e-69 267.7 254 56.7
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 8.5e-69 264.6 176 75.0
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 1.3e-64 250.8 271 49.4
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.7e-61 240.4 176 67.0
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.7e-61 240.4 184 66.8
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 6.5e-61 238.4 211 57.8
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 3.6e-59 232.6 176 67.0
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.4e-58 230.7 256 50.4
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.0e-57 226.9 152 71.1
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.8e-55 220.3 177 61.6
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 7.7e-54 214.9 250 46.0
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 2.3e-53 213.4 176 60.2
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 5.4e-47 192.2 182 57.1
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.7e-45 187.2 246 42.7
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 8.6e-45 184.9 119 72.3
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 5.6e-44 182.2 161 59.6
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.2e-42 175.6 153 60.1
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.2e-41 174.5 143 62.2
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.5e-41 174.1 144 63.9
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 3.4e-41 172.9 213 43.7
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 5.4e-39 165.6 133 63.2
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 1.6e-38 164.1 197 47.2
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 7.8e-38 161.8 116 74.1
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 4.7e-35 152.5 109 66.1
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 1.7e-29 134.0 93 69.9
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.6e-25 120.2 97 61.9
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.7e-24 117.5 87 65.5
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 8.4e-24 115.2 96 62.5
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 8.4e-24 115.2 96 62.5
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.1e-21 105.9 140 45.7
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 8.6e-21 105.1 94 60.6
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 2.0e-17 94.0 77 63.6
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 7.1e-15 85.5 252 29.8
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 7.1e-15 85.5 237 32.9
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.2e-08 63.9 82 42.7
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.2e-08 63.9 82 42.7
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.9e-08 63.5 82 42.7


User provided reference genes

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