Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 2.7e-214 748.4 383 100.0
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 9.1e-130 467.6 381 69.0
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 6.1e-126 454.9 387 66.9
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 5.8e-76 288.9 395 49.9
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 2.2e-67 260.4 391 47.3
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.0e-64 251.5 395 44.8
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 6.8e-61 238.8 384 43.5
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 8.9e-61 238.4 392 43.1
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 3.9e-56 223.0 392 41.8
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.4e-53 214.5 389 38.8
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 4.6e-49 199.5 385 38.2
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 4.3e-47 193.0 391 39.6
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 9.0e-45 185.3 389 36.8
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 1.7e-43 181.0 378 35.7
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 2.2e-43 180.6 385 36.1
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.5e-39 167.2 395 34.9
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-38 164.9 403 34.5
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 4.5e-36 156.4 342 36.5
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 5.8e-36 156.0 397 33.5
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 2.3e-32 144.1 388 32.2
VMungo0540G0572 Vigna mungo HOM05D001259 ORTHO05D008334 3.0e-32 143.7 129 65.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 8.7e-32 142.1 403 30.0
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.9e-31 141.0 411 31.4
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 4.1e-29 133.3 391 31.2
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.9e-29 132.5 412 30.8
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 5.9e-28 129.4 402 32.6
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 1.0e-27 128.6 394 30.5
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-27 127.9 402 32.6
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 2.2e-27 127.5 394 30.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 8.5e-27 125.6 395 31.1
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 8.5e-27 125.6 395 31.1
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.4e-26 124.8 401 31.9
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.5e-26 124.0 414 30.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 3.2e-26 123.6 393 27.5
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 3.2e-26 123.6 388 32.2
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 5.5e-26 122.9 397 31.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.1e-25 120.9 385 30.4
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 3.6e-25 120.2 398 32.2
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 4.6e-25 119.8 377 31.0
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.9e-25 119.0 409 29.6
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.0e-24 117.1 387 29.7
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.7e-24 115.5 403 30.0
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.5e-23 114.8 397 33.0
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.9e-23 114.4 403 30.0
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.6e-22 111.3 412 27.7
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.6e-22 111.3 387 30.5
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 4.8e-22 109.8 382 29.6
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.1e-21 107.1 382 30.9
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.1e-21 106.7 389 29.8
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 5.3e-21 106.3 383 28.5
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 1.2e-20 105.1 385 29.9
TPR.G30198 Trifolium pratense HOM05D006874 ORTHO05D008334 5.9e-20 102.8 431 28.1
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.0e-19 102.1 315 30.5
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.3e-19 101.7 373 30.0
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 2.9e-19 100.5 374 29.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 5.0e-19 99.8 390 30.3
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 5.0e-19 99.8 387 29.7
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.4e-18 98.2 380 29.5
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 1.9e-18 97.8 190 36.3
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.5e-18 97.4 392 26.8
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.5e-18 96.3 383 29.2
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 9.4e-18 95.5 394 28.7
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.6e-17 94.7 389 28.3
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.6e-17 93.6 386 29.0
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 6.1e-17 92.8 382 29.1
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 6.1e-17 92.8 380 25.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 6.7e-16 89.4 388 27.3
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.1e-15 88.6 410 28.5
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.5e-15 88.2 385 26.8
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 7.4e-15 85.9 385 26.8
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 9.7e-15 85.5 385 24.7
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.7e-14 84.7 386 27.7
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.7e-14 84.7 385 26.5
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 4.8e-14 83.2 388 26.0
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.2e-14 82.4 384 26.6
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.1e-13 82.0 402 27.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.8e-13 81.3 421 27.1
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.5e-12 78.2 389 25.2
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 5.9e-12 76.3 392 26.3
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 5.9e-12 76.3 380 25.5
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 7.7e-12 75.9 392 26.3
arahy.Tifrunner.gnm1.ann1.E4Y0Z3 Arachis hypogaea HOM05D032995 ORTHO05D031506 1.0e-11 75.5 387 27.1
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 1.0e-11 75.5 384 27.9
arahy.Tifrunner.gnm1.ann1.34G3CR Arachis hypogaea HOM05D032995 ORTHO05D031506 3.8e-11 73.6 387 26.1
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 5.0e-11 73.2 375 22.9
arahy.Tifrunner.gnm1.ann1.I6QTPS Arachis hypogaea HOM05D032995 ORTHO05D031506 8.5e-11 72.4 387 26.1
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.1e-10 72.0 383 24.5
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.5e-10 70.9 384 26.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.2e-09 68.6 121 39.7
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.6e-09 68.2 382 24.9
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.0e-08 65.5 153 34.0
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.0e-08 63.9 161 33.5
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 5.2e-08 63.2 376 24.2
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 8.8e-08 62.4 128 35.9
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 8.8e-08 62.4 375 25.6
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-06 58.5 197 26.9
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.7e-06 58.2 156 29.5
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.7e-06 58.2 393 23.9
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.7e-06 57.0 390 24.6


User provided reference genes

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