Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 1.5e-27 125.6 67 100.0
Glyma.04G045900 Glycine max HOM05D015670 ORTHO05D009588 1.8e-25 118.6 67 95.5
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 5.1e-20 100.5 67 86.6
Phvul.009G071900 Phaseolus vulgaris HOM05D015670 ORTHO05D009588 1.1e-14 82.8 82 64.6
Lj1g0025886 Lotus japonicus HOM05D015670 ORTHO05D009588 1.6e-13 79.0 67 67.2
Psat5g038880 Pisum sativum HOM05D015670 ORTHO05D009588 6.0e-13 77.0 67 68.7
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.0e-12 76.3 73 63.0
Lalb_Chr23g0267531 Lupinus albus HOM05D015670 ORTHO05D009588 1.0e-12 76.3 104 50.0
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 3.0e-12 74.7 73 61.6
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 6.7e-12 73.6 73 60.3
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 4.3e-11 70.9 73 58.9
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.4e-09 65.1 74 56.8
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 2.4e-09 65.1 73 58.9
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 2.6e-08 61.6 71 53.5
Lalb_Chr08g0245551 Lupinus albus HOM05D015670 ORTHO05D009588 4.5e-08 60.8 28 100.0
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 4.5e-08 60.8 75 53.3
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 5.8e-08 60.5 73 54.8
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 5.8e-08 60.5 73 54.8
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 5.8e-08 60.5 74 54.1
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.0e-07 59.7 74 54.1
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.3e-07 59.3 74 54.1
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 1.3e-07 59.3 70 54.3
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 1.3e-07 59.3 74 52.7
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.7e-07 58.9 74 54.1
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.8e-07 57.8 73 50.7
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.8e-07 57.8 73 50.7
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 4.9e-07 57.4 70 51.4
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 4.9e-07 57.4 70 50.0
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 1.1e-06 56.2 70 50.0
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.4e-06 55.8 70 51.4
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.4e-06 55.8 70 48.6
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.9e-06 55.5 70 51.4
Lalb_Chr11g0062881 Lupinus albus HOM05D015670 ORTHO05D009588 5.5e-06 53.9 66 51.5
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 7.1e-06 53.5 70 52.9
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 9.3e-06 53.1 41 65.9


User provided reference genes

Program Settings