Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 6.1e-159 564.3 329 100.0
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.4e-150 536.6 329 80.2
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 3.4e-149 531.9 329 94.8
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 7.5e-149 530.8 329 94.2
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 7.3e-144 514.2 329 90.9
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 6.1e-143 511.1 329 90.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 3.2e-139 498.8 325 88.3
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 4.1e-139 498.4 328 89.3
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 5.9e-138 494.6 322 73.9
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.3e-137 492.7 327 87.8
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.1e-136 490.3 325 72.3
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.9e-136 489.6 325 72.6
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.9e-136 489.6 324 87.3
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 2.5e-136 489.2 325 84.3
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 2.8e-135 485.7 327 85.9
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 4.7e-135 485.0 326 71.2
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 6.2e-135 484.6 330 70.6
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.8e-134 483.0 329 86.0
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.3e-134 482.6 327 85.3
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 4.0e-134 481.9 326 70.6
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 5.2e-134 481.5 324 85.5
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 3.4e-133 478.8 324 83.0
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.1e-131 473.8 329 83.9
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.4e-131 472.6 329 73.3
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 3.2e-131 472.2 329 83.6
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 4.1e-131 471.9 327 85.3
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.6e-130 468.4 329 83.3
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.6e-130 468.4 325 82.8
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 4.6e-130 468.4 322 84.8
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 7.8e-130 467.6 325 83.1
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.0e-129 467.2 329 83.3
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.7e-129 466.5 329 82.7
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.3e-129 466.1 324 83.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 2.3e-129 466.1 329 83.0
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.3e-129 466.1 327 84.1
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.3e-129 466.1 321 68.8
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.0e-129 465.7 328 69.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 6.6e-129 464.5 324 83.0
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 8.6e-129 464.2 324 82.1
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.5e-128 463.4 329 70.8
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.5e-128 463.4 324 80.2
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.5e-128 462.6 325 79.4
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.5e-128 462.6 324 71.6
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 4.3e-128 461.8 324 81.8
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 5.6e-128 461.5 322 68.9
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 9.5e-128 460.7 328 66.5
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 9.5e-128 460.7 324 81.8
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 9.5e-128 460.7 327 83.5
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.2e-127 460.3 327 75.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 1.2e-127 460.3 324 69.8
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.6e-127 459.9 324 81.2
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.1e-127 459.5 325 81.8
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.8e-127 459.1 325 84.0
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.8e-127 459.1 330 82.4
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 3.6e-127 458.8 325 67.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 4.7e-127 458.4 327 67.6
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 4.7e-127 458.4 325 81.8
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 8.1e-127 457.6 329 81.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.4e-126 456.8 329 81.2
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.4e-126 456.8 329 74.5
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.4e-126 456.8 326 67.5
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.3e-126 456.1 329 81.2
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.0e-126 455.3 325 67.1
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 2.0e-125 453.0 324 80.9
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.9e-125 450.7 326 66.6
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.9e-124 449.1 327 66.7
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 4.9e-124 448.4 322 82.0
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 4.9e-124 448.4 325 79.1
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.4e-123 446.8 321 80.1
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.4e-123 446.8 326 66.3
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 2.4e-123 446.0 322 74.2
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.2e-123 445.7 236 85.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 4.1e-123 445.3 323 65.6
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 2.7e-122 442.6 325 65.2
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.6e-122 441.8 329 79.3
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.3e-121 440.3 236 83.9
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.1e-120 437.2 370 59.5
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.5e-120 436.8 328 78.0
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.5e-120 436.8 325 79.4
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.9e-120 436.4 325 69.8
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 3.3e-120 435.6 236 84.7
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 2.1e-119 433.0 325 63.4
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.4e-118 430.3 325 63.1
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.4e-118 430.3 325 63.4
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.4e-118 429.5 325 62.8
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 4.0e-118 428.7 325 62.8
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.2e-117 427.2 236 80.9
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 4.1e-115 418.7 321 62.3
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.1e-114 416.4 325 61.8
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 2.7e-114 416.0 330 74.8
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 3.3e-112 409.1 317 76.0
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 2.2e-108 396.4 234 75.6
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 4.9e-108 395.2 310 76.5
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 1.6e-106 390.2 323 58.5
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 9.6e-104 380.9 327 72.8
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.2e-103 378.3 335 56.7
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.1e-98 363.2 325 53.5
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 6.7e-97 358.2 321 69.8
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 4.3e-96 355.5 324 67.6
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 4.0e-94 349.0 264 64.8
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 2.6e-93 346.3 258 84.9
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.4e-93 345.9 278 81.3
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 4.2e-91 339.0 266 78.9
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.5e-84 315.1 248 64.9
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 2.7e-82 309.7 250 82.4
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 1.7e-76 290.4 246 77.2
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.5e-69 267.3 375 38.4
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 5.0e-68 262.3 244 71.7
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 4.4e-64 249.2 191 66.0
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 6.3e-63 245.4 227 54.2
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 5.3e-62 242.3 332 45.5
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 3.2e-59 233.0 189 58.2
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 6.1e-58 228.8 138 75.4
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 5.5e-51 205.7 126 73.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.1e-50 202.2 124 71.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 8.0e-42 175.3 94 81.9
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 3.1e-17 93.6 87 58.6
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.2e-16 91.7 82 53.7
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 5.6e-11 72.8 41 82.9
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 3.1e-09 67.0 95 44.2
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.9e-07 59.7 39 66.7
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 3.2e-06 57.0 40 72.5
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 7.1e-06 55.8 61 49.2


User provided reference genes

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