Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 1.4e-51 206.1 107 100.0
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 1.1e-40 169.9 107 86.9
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 1.3e-33 146.4 111 73.0
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 1.7e-33 146.0 111 72.1
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 2.8e-20 102.1 113 58.4
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 1.5e-18 96.3 111 54.1
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 2.9e-17 92.0 110 52.7
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 3.9e-14 81.6 92 54.3
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 3.3e-13 78.6 115 51.3
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 9.0e-11 70.5 96 47.9
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 2.0e-10 69.3 116 43.1
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 2.0e-10 69.3 70 57.1
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 2.9e-09 65.5 74 51.4
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 6.5e-09 64.3 113 39.8
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 6.5e-09 64.3 68 54.4
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 8.4e-09 63.9 104 41.3
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 8.4e-09 63.9 106 44.3
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 8.4e-09 63.9 113 39.8
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 8.4e-09 63.9 105 43.8
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 1.1e-08 63.5 65 53.8
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 1.4e-08 63.2 106 44.3
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 2.5e-08 62.4 96 41.7
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 3.2e-08 62.0 114 38.6
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 3.2e-08 62.0 94 44.7
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 4.2e-08 61.6 106 44.3
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 4.2e-08 61.6 101 41.6
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 5.5e-08 61.2 92 43.5
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 7.1e-08 60.8 107 43.0
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 9.3e-08 60.5 65 50.8
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 9.3e-08 60.5 111 39.6
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 9.3e-08 60.5 111 39.6
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 2.1e-07 59.3 117 35.9
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 2.7e-07 58.9 95 40.0
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 6.0e-07 57.8 97 42.3
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 7.9e-07 57.4 67 46.3
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 7.9e-07 57.4 76 48.7
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.3e-06 56.6 93 43.0
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 5.1e-06 54.7 106 37.7
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 5.1e-06 54.7 100 38.0
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 5.1e-06 54.7 101 36.6
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 6.7e-06 54.3 92 37.0


User provided reference genes

Program Settings