Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.9e-56 222.2 110 100.0
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 5.0e-41 171.0 110 77.3
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 9.8e-37 156.8 95 81.1
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 2.3e-30 135.6 114 61.4
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 3.1e-30 135.2 116 59.5
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.0e-30 134.8 116 59.5
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 8.9e-30 133.7 101 61.4
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 2.0e-29 132.5 109 60.6
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 2.0e-29 132.5 112 62.5
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.6e-29 132.1 110 61.8
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 4.4e-29 131.3 113 61.1
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 7.5e-29 130.6 109 60.6
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 7.5e-29 130.6 110 60.9
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.3e-28 129.8 113 57.5
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 2.2e-28 129.0 104 60.6
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 3.7e-28 128.3 112 60.7
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 3.7e-28 128.3 103 63.1
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 8.3e-28 127.1 103 61.2
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 1.1e-27 126.7 104 59.6
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.4e-27 126.3 103 59.2
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.9e-27 125.9 108 59.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.9e-27 125.9 107 61.7
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 4.1e-27 124.8 103 58.3
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 4.1e-27 124.8 101 60.4
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 7.1e-27 124.0 108 58.3
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 7.1e-27 124.0 112 58.0
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 7.1e-27 124.0 112 58.0
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 9.2e-27 123.6 110 56.4
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 9.2e-27 123.6 101 61.4
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.2e-26 123.2 105 59.0
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-26 122.5 112 57.1
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.1e-26 122.5 101 60.4
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.7e-26 122.1 105 59.0
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 4.6e-26 121.3 105 58.1
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 4.6e-26 121.3 110 57.3
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.6e-26 121.3 101 60.4
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 4.6e-26 121.3 109 56.0
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 4.6e-26 121.3 109 56.0
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 6.0e-26 120.9 107 56.1
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 6.0e-26 120.9 110 57.3
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.3e-25 119.8 112 55.4
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 2.3e-25 119.0 107 53.3
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.3e-25 119.0 110 56.4
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 3.0e-25 118.6 102 60.8
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 3.9e-25 118.2 110 54.5
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 5.1e-25 117.9 111 56.8
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 6.6e-25 117.5 114 52.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 6.6e-25 117.5 110 57.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 6.6e-25 117.5 101 57.4
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 8.6e-25 117.1 104 57.7
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.1e-24 116.7 119 52.1
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 1.5e-24 116.3 119 51.3
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.5e-24 116.3 105 60.0
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 2.5e-24 115.5 102 54.9
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.5e-24 115.5 103 55.3
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.5e-24 115.5 116 52.6
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 3.3e-24 115.2 118 50.0
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.3e-24 115.2 105 59.0
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 3.3e-24 115.2 106 54.7
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.3e-24 115.2 102 57.8
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 4.3e-24 114.8 111 49.5
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.3e-24 114.8 118 50.0
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 4.3e-24 114.8 118 50.0
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 4.3e-24 114.8 118 50.0
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 5.6e-24 114.4 105 50.5
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 5.6e-24 114.4 117 52.1
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 7.3e-24 114.0 118 50.0
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 7.3e-24 114.0 104 55.8
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 7.3e-24 114.0 115 52.2
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 9.5e-24 113.6 112 56.2
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 9.5e-24 113.6 116 51.7
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.2e-23 113.2 119 50.4
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.2e-23 113.2 105 54.3
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.1e-23 112.5 116 49.1
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.1e-23 112.5 105 58.1
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 3.6e-23 111.7 107 54.2
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 4.7e-23 111.3 104 56.7
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 6.2e-23 110.9 115 50.4
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 6.2e-23 110.9 103 55.3
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 8.1e-23 110.5 121 48.8
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 8.1e-23 110.5 106 52.8
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 8.1e-23 110.5 105 54.3
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.1e-22 110.2 108 50.0
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.1e-22 110.2 107 50.5
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.4e-22 109.8 114 51.8
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 1.4e-22 109.8 103 53.4
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 2.4e-22 109.0 105 54.3
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.4e-22 109.0 107 51.4
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 3.1e-22 108.6 103 51.5
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 3.1e-22 108.6 107 51.4
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.0e-22 108.2 120 47.5
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.0e-22 108.2 114 49.1
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 5.2e-22 107.8 114 50.9
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 5.2e-22 107.8 114 50.9
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 5.2e-22 107.8 115 49.6
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 6.8e-22 107.5 97 58.8
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 8.9e-22 107.1 110 51.8
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 1.2e-21 106.7 105 52.4
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.5e-21 106.3 107 50.5
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.4e-21 104.8 111 49.5
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-20 103.2 118 45.8
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 1.3e-20 103.2 118 45.8
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 2.2e-20 102.4 115 47.0
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.9e-20 102.1 97 55.7
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 8.4e-20 100.5 116 46.6
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 8.4e-20 100.5 110 46.4
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 8.4e-20 100.5 114 45.6
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.1e-19 100.1 116 46.6
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.1e-19 100.1 116 44.8
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 1.1e-19 100.1 101 50.5
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.9e-19 99.4 103 49.5
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 7.1e-19 97.4 103 47.6
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 7.1e-19 97.4 112 47.3
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 7.1e-19 97.4 115 47.0
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 9.2e-19 97.1 107 46.7
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.1e-18 95.9 116 43.1
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.7e-18 95.5 105 48.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 3.5e-18 95.1 117 44.4
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 3.5e-18 95.1 117 44.4
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 7.3e-16 87.4 91 47.3
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 6.2e-15 84.3 92 44.6
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.8e-14 82.8 101 43.6
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.2e-13 80.1 117 39.3
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 1.7e-12 76.3 107 41.1
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 4.2e-11 71.6 79 44.3
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 6.0e-10 67.8 62 58.1
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 4.8e-07 58.2 68 44.1
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.0e-06 55.1 66 43.9


User provided reference genes

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