Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 6.2e-103 377.5 192 100.0
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 6.0e-82 307.8 192 84.4
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 6.0e-82 307.8 191 83.8
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 4.0e-78 295.0 187 79.7
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 4.9e-76 288.1 190 78.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 4.6e-74 281.6 174 79.3
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.3e-71 273.5 183 77.0
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.6e-71 273.1 182 74.2
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.8e-71 271.6 182 75.8
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.1e-70 270.4 163 82.8
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 4.0e-70 268.5 168 80.4
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 6.9e-70 267.7 187 72.2
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.2e-69 266.9 169 80.5
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.5e-69 266.5 179 76.0
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 4.9e-68 261.5 193 71.5
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 6.5e-68 261.2 181 73.5
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 6.5e-68 261.2 180 75.0
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 6.5e-68 261.2 161 81.4
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 1.1e-67 260.4 187 75.4
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.4e-67 260.0 169 79.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.4e-67 260.0 194 71.6
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 1.9e-67 259.6 187 74.9
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 3.2e-67 258.8 187 75.4
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 7.1e-67 257.7 177 71.8
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 4.6e-66 255.0 180 72.8
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.6e-66 255.0 172 74.4
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.0e-65 253.8 194 68.0
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 3.9e-65 251.9 179 72.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.1e-65 251.5 180 71.7
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 8.7e-65 250.8 177 74.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.7e-65 250.8 180 71.1
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 2.5e-64 249.2 165 75.8
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 4.3e-64 248.4 178 72.5
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 4.3e-64 248.4 179 70.9
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.7e-64 248.1 166 74.7
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 5.7e-64 248.1 177 72.3
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 9.7e-64 247.3 166 75.9
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.3e-63 246.9 177 70.1
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.3e-63 246.9 178 71.9
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 2.2e-63 246.1 178 71.9
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 3.7e-63 245.4 193 67.9
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 3.7e-63 245.4 195 69.7
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.1e-62 243.8 189 70.4
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.4e-62 243.4 182 70.9
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 3.1e-62 242.3 182 70.3
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 4.1e-62 241.9 163 76.1
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 4.1e-62 241.9 162 72.2
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 5.3e-62 241.5 179 70.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.5e-61 240.0 194 67.0
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 3.4e-61 238.8 175 69.7
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 5.9e-61 238.0 184 65.2
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 5.9e-61 238.0 185 67.0
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.0e-60 237.3 189 68.3
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.3e-60 236.9 169 72.2
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.7e-60 236.5 182 67.0
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 2.2e-60 236.1 186 68.8
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.8e-60 235.3 178 70.2
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 8.5e-60 234.2 176 68.2
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 8.5e-60 234.2 178 70.2
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 8.5e-60 234.2 184 68.5
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.1e-59 233.8 177 70.6
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.9e-59 233.0 192 64.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.2e-58 230.3 181 68.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 3.6e-58 228.8 181 67.4
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 7.9e-58 227.6 174 66.1
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-57 226.9 144 77.8
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 2.3e-57 226.1 193 65.3
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 2.3e-57 226.1 179 67.6
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.5e-56 223.4 178 64.0
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.3e-56 221.9 187 64.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 2.2e-55 219.5 162 67.9
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.8e-55 219.2 170 66.5
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 4.1e-54 215.3 136 80.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 4.1e-54 215.3 149 71.8
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 5.3e-54 214.9 237 51.9
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.2e-53 213.8 183 60.7
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.2e-53 213.8 165 66.1
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.2e-53 213.8 165 66.1
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.0e-53 213.0 165 64.8
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 2.6e-53 212.6 165 65.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 2.6e-53 212.6 165 65.5
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 3.4e-53 212.2 170 64.7
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 3.4e-53 212.2 165 65.5
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 4.5e-53 211.8 170 64.1
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.0e-52 210.7 154 72.1
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 5.0e-52 208.4 152 67.1
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 1.1e-51 207.2 143 73.4
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 2.5e-51 206.1 175 61.1
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 4.2e-51 205.3 136 76.5
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 4.7e-50 201.8 100 98.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 4.7e-50 201.8 173 60.1
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.4e-49 200.3 136 76.5
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.1e-46 190.7 131 77.9
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 6.5e-44 181.4 143 66.4
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 2.6e-40 169.5 168 53.6
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.9e-36 156.0 196 50.5
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 9.4e-35 151.0 178 51.7
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.2e-34 150.6 170 50.6
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.6e-34 150.2 191 47.6
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-31 140.2 181 48.6
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.3e-28 130.6 82 75.6
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 5.0e-28 128.6 190 44.7
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 8.0e-26 121.3 87 70.1
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.2e-24 117.5 74 77.0
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.1e-22 110.9 120 50.0
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.2e-21 107.5 150 38.0
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.0e-20 104.4 72 69.4
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.5e-19 100.5 180 40.6
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 2.3e-17 93.2 138 40.6
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.3e-12 77.4 74 55.4
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.8e-08 62.0 75 45.3
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 7.5e-08 61.6 40 75.0
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.3e-07 60.8 36 75.0


User provided reference genes

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