Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 2.4e-47 191.8 96 100.0
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 8.9e-42 173.3 101 89.1
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.3e-37 159.5 101 81.2
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.9e-36 155.6 101 79.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 7.3e-36 153.7 101 75.2
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.1e-35 152.1 101 74.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 3.6e-35 151.4 95 83.2
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 8.0e-35 150.2 95 81.1
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 99 75.8
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 3.4e-33 144.8 97 76.3
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 4.4e-33 144.4 101 73.3
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 8.3e-32 140.2 98 69.4
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.4e-31 139.4 99 71.7
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.4e-31 139.4 100 75.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.9e-31 139.0 95 70.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.4e-31 138.7 99 70.7
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.2e-31 138.3 101 75.2
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.1e-31 137.9 101 74.3
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 5.4e-31 137.5 98 71.4
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 5.4e-31 137.5 101 72.3
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 7.0e-31 137.1 92 77.2
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 7.0e-31 137.1 99 71.7
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.6e-30 136.0 97 72.2
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.0e-30 135.6 97 72.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 2.0e-30 135.6 100 69.0
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.0e-30 135.6 92 75.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.7e-30 135.2 94 70.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 2.7e-30 135.2 97 71.1
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.6e-30 134.4 94 74.5
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.6e-30 134.4 94 74.5
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 6.0e-30 134.0 90 72.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 7.8e-30 133.7 101 69.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 7.8e-30 133.7 101 72.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 7.8e-30 133.7 93 72.0
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.0e-29 133.3 99 68.7
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.0e-29 133.3 103 68.0
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.3e-29 132.1 97 68.0
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.0e-29 131.7 100 72.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 3.9e-29 131.3 90 72.2
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 3.9e-29 131.3 94 70.2
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 5.0e-29 131.0 100 72.0
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 5.0e-29 131.0 90 70.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 6.6e-29 130.6 99 65.7
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 6.6e-29 130.6 96 69.8
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 6.6e-29 130.6 94 72.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 8.6e-29 130.2 103 65.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 8.6e-29 130.2 103 65.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 8.6e-29 130.2 103 65.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 8.6e-29 130.2 103 65.0
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 8.6e-29 130.2 91 73.6
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.1e-28 129.8 99 63.6
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.1e-28 129.8 94 71.3
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.1e-28 129.8 97 69.1
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.5e-28 129.4 91 71.4
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.5e-28 128.6 90 67.8
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.5e-28 128.6 90 67.8
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.5e-28 128.6 90 67.8
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.5e-28 128.6 90 67.8
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.5e-28 128.6 99 65.7
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 3.3e-28 128.3 99 65.7
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 3.3e-28 128.3 100 67.0
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 3.3e-28 128.3 96 68.8
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.3e-28 128.3 95 68.4
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.3e-28 128.3 95 68.4
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 3.3e-28 128.3 95 68.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 4.3e-28 127.9 89 69.7
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 4.3e-28 127.9 89 70.8
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 4.3e-28 127.9 92 72.8
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 5.6e-28 127.5 90 66.7
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 5.6e-28 127.5 100 69.0
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 7.3e-28 127.1 99 64.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.6e-27 125.9 100 67.0
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.6e-27 125.9 94 68.1
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.6e-27 125.9 92 72.8
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.1e-27 125.6 105 65.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 2.8e-27 125.2 97 67.0
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 2.8e-27 125.2 87 72.4
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.6e-27 124.8 93 72.0
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-26 122.9 99 62.6
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.4e-26 122.9 101 66.3
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.8e-26 122.5 89 67.4
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.8e-26 122.5 92 68.5
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 3.1e-26 121.7 97 63.9
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 3.1e-26 121.7 94 62.8
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 5.2e-26 120.9 99 61.6
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 5.2e-26 120.9 88 69.3
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 6.8e-26 120.6 99 61.6
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 6.8e-26 120.6 99 61.6
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 6.8e-26 120.6 99 61.6
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.2e-25 119.8 99 60.6
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 4.4e-25 117.9 128 57.8
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.7e-24 115.9 88 65.9
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.2e-24 115.5 102 61.8
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 1.1e-23 113.2 80 70.0
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.4e-23 112.8 80 67.5
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 4.1e-23 111.3 82 72.0
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 7.1e-23 110.5 84 65.5
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.2e-22 109.8 89 62.9
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 2.1e-22 109.0 95 66.3
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.7e-22 108.6 86 61.6
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 6.0e-22 107.5 83 63.9
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.7e-21 105.9 80 65.0
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.7e-19 97.8 96 57.3
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.1e-18 96.7 81 61.7
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.8e-18 95.9 62 74.2
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 2.3e-18 95.5 81 60.5
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 4.0e-18 94.7 81 63.0
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 7.6e-17 90.5 89 55.1
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 2.9e-16 88.6 68 64.7
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.5e-12 76.3 96 45.8
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.9e-12 75.9 94 43.6
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.8e-10 69.3 58 65.5
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.1e-10 68.6 48 64.6
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 8.9e-10 67.0 82 46.3
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 9.9e-09 63.5 50 58.0
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 4.9e-08 61.2 69 44.9
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.9e-07 59.3 118 40.7
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 6.0e-06 54.3 47 48.9


User provided reference genes

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