Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G010300 Glycine max HOM05D000697 ORTHO05D010185 4.4e-17 90.1 43 100.0
Glyma.11G114900 Glycine max HOM05D000697 ORTHO05D010185 4.1e-15 83.6 43 97.7
Glyma.12G040700 Glycine max HOM05D000697 ORTHO05D010185 4.1e-15 83.6 43 97.7
Phvul.009G005900 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 4.1e-15 83.6 43 97.7
Lalb_Chr08g0246681 Lupinus albus HOM05D000697 ORTHO05D000169 9.2e-15 82.4 40 95.0
Glyma.04G010400 Glycine max HOM05D000697 ORTHO05D010185 3.5e-14 80.5 43 95.3
Phvul.011G042700 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 6.0e-14 79.7 43 93.0
Lalb_Chr23g0265321 Lupinus albus HOM05D000697 ORTHO05D010185 2.3e-13 77.8 43 83.7
Potri.009G119650 Populus trichocarpa HOM05D000697 ORTHO05D010185 2.5e-12 74.3 43 88.4
Potri.004G158150 Populus trichocarpa HOM05D000697 ORTHO05D010185 5.6e-12 73.2 43 86.0
CiPaw.05G068000 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.6e-11 71.6 43 83.7
Manes.04G074110 Manihot esculenta HOM05D000697 ORTHO05D010185 4.7e-11 70.1 43 86.0
Manes.11G084900 Manihot esculenta HOM05D000697 ORTHO05D010185 8.1e-11 69.3 43 83.7
CiPaw.06G133300 Carya illinoinensis HOM05D000697 ORTHO05D010185 4.0e-10 67.0 43 81.4
Thecc.02G081000 Theobroma cacao HOM05D000697 ORTHO05D010185 4.0e-10 67.0 43 83.7
Carub.0007s0570 Capsella rubella HOM05D000697 ORTHO05D010185 5.2e-10 66.6 40 85.0
Gohir.D02G217700 Gossypium hirsutum HOM05D000697 ORTHO05D010185 6.8e-10 66.2 43 83.7
Prupe.8G091700 Prunus persica HOM05D000697 ORTHO05D010185 6.8e-10 66.2 43 79.1
CAN.G1544.1 Capsicum annuum HOM05D000697 ORTHO05D010185 7.6e-09 62.8 43 74.4
MD05G1062200 Malus domestica HOM05D000697 ORTHO05D000169 7.6e-09 62.8 40 77.5
FAN20G0406 Fragaria x ananassa HOM05D000697 ORTHO05D000169 9.9e-09 62.4 40 77.5
FAN24G3114 Fragaria x ananassa HOM05D000697 ORTHO05D000169 9.9e-09 62.4 40 77.5
FAN27G3145 Fragaria x ananassa HOM05D000697 ORTHO05D000169 9.9e-09 62.4 40 77.5
Gohir.A12G062300 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.7e-08 61.6 43 74.4
Thecc.01G028200 Theobroma cacao HOM05D000697 ORTHO05D010185 1.7e-08 61.6 43 74.4
FAN19G2851 Fragaria x ananassa HOM05D000697 ORTHO05D000169 2.2e-08 61.2 41 73.2
FAN26G2107 Fragaria x ananassa HOM05D000697 ORTHO05D000169 2.2e-08 61.2 41 73.2
FAN28G2503 Fragaria x ananassa HOM05D000697 ORTHO05D000169 2.2e-08 61.2 41 73.2
Prupe.7G160500 Prunus persica HOM05D000697 ORTHO05D010185 2.2e-08 61.2 43 72.1
Gohir.A04G124500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.9e-08 60.8 37 83.8
Gohir.D04G166600 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.9e-08 60.8 37 83.8
Gohir.D11G188600 Gossypium hirsutum HOM05D000697 ORTHO05D010185 2.9e-08 60.8 43 72.1
Gorai.012G155000 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.9e-08 60.8 37 83.8
CiPaw.08G138600 Carya illinoinensis HOM05D000697 ORTHO05D010185 3.7e-08 60.5 43 72.1
Gorai.007G200600 Gossypium raimondii HOM05D000697 ORTHO05D000169 6.4e-08 59.7 39 74.4
Manes.02G097800 Manihot esculenta HOM05D000697 ORTHO05D010185 6.4e-08 59.7 43 72.1
Potri.005G119400 Populus trichocarpa HOM05D000697 ORTHO05D010185 6.4e-08 59.7 43 69.8
CiPaw.07G050800 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 69.8
CiPaw.07G157300 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
CiPaw.08G060300 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
FAN15G1563 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.1e-07 58.9 36 80.6
Glyma.14G071500 Glycine max HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
Glyma.17G253132 Glycine max HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
Gohir.A11G181800 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.1e-07 58.9 39 74.4
Lalb_Chr14g0369491 Lupinus albus HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
MBI10_g00750_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 1.1e-07 58.9 41 73.2
Manes.05G155332 Manihot esculenta HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
Manes.18G021001 Manihot esculenta HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
Phvul.001G011900 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 1.1e-07 58.9 43 72.1
Cc10_g02470 Coffea canephora HOM05D000697 ORTHO05D010185 1.9e-07 58.2 43 69.8
arahy.Tifrunner.gnm1.ann1.T95EUW Arachis hypogaea HOM05D000697 ORTHO05D010185 2.4e-07 57.8 39 74.4
Migut.N00473 Erythranthe guttata HOM05D000697 ORTHO05D010185 2.4e-07 57.8 43 69.8
Gohir.A06G007100 Gossypium hirsutum HOM05D000697 ORTHO05D010185 2.4e-07 57.8 43 69.8
Gohir.D05G194400 Gossypium hirsutum HOM05D000697 ORTHO05D010185 2.4e-07 57.8 43 69.8
Potri.002G032000 Populus trichocarpa HOM05D000697 ORTHO05D010185 2.4e-07 57.8 43 69.8
Thecc.08G033000 Theobroma cacao HOM05D000697 ORTHO05D010185 2.4e-07 57.8 43 69.8
MD02G1140600 Malus domestica HOM05D000697 ORTHO05D000169 3.2e-07 57.4 36 77.8
Migut.C00767 Erythranthe guttata HOM05D000697 ORTHO05D010185 4.1e-07 57.0 43 69.8
Potri.005G231250 Populus trichocarpa HOM05D000697 ORTHO05D010185 5.4e-07 56.6 42 69.0
Prupe.1G374500 Prunus persica HOM05D000697 ORTHO05D010185 5.4e-07 56.6 43 67.4
Gohir.D02G095800 Gossypium hirsutum HOM05D000697 ORTHO05D010185 7.1e-07 56.2 42 66.7
Migut.B00215 Erythranthe guttata HOM05D000697 ORTHO05D010185 9.2e-07 55.8 41 70.7
vmacro04298 Vaccinium macrocarpon HOM05D000697 ORTHO05D010185 9.2e-07 55.8 39 71.8
CAN.G358.36 Capsicum annuum HOM05D000697 ORTHO05D010185 1.2e-06 55.5 43 65.1
FAN27G0060 Fragaria x ananassa HOM05D000697 ORTHO05D010185 1.2e-06 55.5 39 69.2
BolC3t18161H Brassica oleracea HOM05D000697 ORTHO05D010185 2.1e-06 54.7 43 65.1
BraA06t26266Z Brassica rapa HOM05D000697 ORTHO05D010185 2.1e-06 54.7 43 65.1
Carub.0003s3231 Capsella rubella HOM05D000697 ORTHO05D010185 2.1e-06 54.7 43 65.1
Gohir.D01G102800 Gossypium hirsutum HOM05D000697 ORTHO05D010185 2.1e-06 54.7 39 69.2
Potri.007G020000 Populus trichocarpa HOM05D000697 ORTHO05D010185 2.1e-06 54.7 43 67.4
Carub.0002s2224 Capsella rubella HOM05D000697 ORTHO05D010185 2.7e-06 54.3 43 65.1
CARHR068750 Cardamine hirsuta HOM05D000697 ORTHO05D010185 2.7e-06 54.3 43 65.1
Aa31LG8G15820 Aethionema arabicum HOM05D000697 ORTHO05D010185 3.5e-06 53.9 39 66.7
CAN.G568.4 Capsicum annuum HOM05D000697 ORTHO05D010185 3.5e-06 53.9 43 65.1
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 3.5e-06 53.9 36 72.2
Glyma.05G157100 Glycine max HOM05D000697 ORTHO05D010185 3.5e-06 53.9 41 65.9
Glyma.08G115251 Glycine max HOM05D000697 ORTHO05D010185 3.5e-06 53.9 41 65.9
Gohir.D12G062100 Gossypium hirsutum HOM05D000697 ORTHO05D000169 3.5e-06 53.9 36 77.8
Gorai.008G065300 Gossypium raimondii HOM05D000697 ORTHO05D000169 3.5e-06 53.9 36 77.8
Phvul.002G237700 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 3.5e-06 53.9 41 65.9
CAN.G1373.26 Capsicum annuum HOM05D000697 ORTHO05D010185 6.0e-06 53.1 37 70.3
ClCG05G018700 Citrullus lanatus HOM05D000697 ORTHO05D010185 6.0e-06 53.1 41 65.9
FAN15G1852 Fragaria x ananassa HOM05D000697 ORTHO05D000169 6.0e-06 53.1 39 66.7
FAN26G2173 Fragaria x ananassa HOM05D000697 ORTHO05D010185 6.0e-06 53.1 39 66.7
ClCG01G019930 Citrullus lanatus HOM05D000697 ORTHO05D010185 7.8e-06 52.8 39 69.2
Eucgr.I02397 Eucalyptus grandis HOM05D000697 ORTHO05D010185 7.8e-06 52.8 41 65.9


User provided reference genes

Program Settings