Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 4.9e-174 614.4 316 100.0
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 5.9e-159 564.3 334 89.8
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 2.4e-152 542.3 319 89.3
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 6.1e-148 527.7 319 87.8
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 9.1e-136 487.3 324 77.5
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 1.2e-135 486.9 318 75.5
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 2.5e-133 479.2 322 78.6
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 4.2e-133 478.4 319 82.1
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 3.6e-124 448.7 330 72.4
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 5.2e-123 444.9 334 73.1
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 1.7e-121 439.9 322 75.2
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 5.9e-119 431.4 316 72.8
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 4.3e-117 425.2 323 71.5
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 2.8e-116 422.5 326 70.6
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.8e-115 419.9 316 65.5
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 4.9e-113 411.8 318 69.5
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.4e-112 409.5 332 67.5
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.7e-111 406.0 330 67.6
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.1e-108 396.4 317 65.3
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 2.1e-108 396.4 317 65.3
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 3.6e-108 395.6 340 63.8
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 6.2e-108 394.8 326 66.0
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 6.2e-108 394.8 337 65.3
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 8.0e-108 394.4 323 60.7
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.4e-107 393.7 318 65.1
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.1e-107 392.5 354 62.4
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 6.8e-107 391.3 351 62.7
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 1.2e-106 390.6 354 58.8
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.2e-106 390.6 344 64.0
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 2.0e-106 389.8 323 66.3
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 3.4e-106 389.0 293 70.6
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 4.4e-106 388.7 321 66.4
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 9.8e-106 387.5 316 64.6
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.7e-105 386.7 352 62.5
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.1e-104 384.0 346 62.4
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 4.1e-104 382.1 320 65.9
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 1.2e-103 380.6 327 64.2
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 2.7e-103 379.4 320 56.2
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 4.6e-103 378.6 382 56.8
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 6.0e-103 378.3 324 61.4
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 6.0e-103 378.3 322 64.0
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.3e-102 377.1 321 60.4
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 3.0e-102 375.9 321 55.8
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.2e-100 370.5 323 62.8
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.6e-100 370.2 317 58.0
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 2.1e-100 369.8 328 61.6
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 2.8e-100 369.4 361 58.4
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 6.2e-100 368.2 315 64.8
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 1.1e-99 367.5 315 64.8
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 6.8e-99 364.8 330 57.3
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.2e-98 364.0 316 62.7
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 2.2e-97 359.8 322 61.5
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.9e-97 359.4 316 57.0
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.4e-96 356.3 317 59.9
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.2e-95 354.0 323 61.0
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.0e-94 350.9 307 60.6
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 5.1e-94 348.6 318 61.3
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 3.3e-93 345.9 347 57.3
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 4.3e-93 345.5 328 57.9
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 6.2e-92 341.7 325 56.9
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 5.2e-91 338.6 336 52.1
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 7.6e-90 334.7 314 59.2
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 2.2e-89 333.2 261 63.6
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 6.4e-89 331.6 312 57.1
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 9.3e-88 327.8 329 55.9
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 3.5e-87 325.9 315 58.7
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.0e-82 310.1 340 53.2
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 3.4e-82 309.3 340 53.2
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 4.4e-82 308.9 346 54.3
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 7.6e-82 308.1 340 52.9
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 1.3e-81 307.4 323 53.6
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 2.2e-81 306.6 314 55.4
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 3.8e-81 305.8 340 48.8
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 6.4e-81 305.1 320 53.1
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.1e-80 304.3 329 52.0
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 4.2e-80 302.4 310 50.6
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.2e-79 300.8 336 48.2
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.1e-79 300.1 310 50.0
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 2.7e-79 299.7 348 51.1
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 2.7e-79 299.7 348 51.1
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 2.7e-79 299.7 348 51.1
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 2.7e-79 299.7 349 47.0
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 3.5e-79 299.3 348 51.4
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 6.0e-79 298.5 348 51.1
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.0e-79 298.5 310 50.3
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 2.3e-78 296.6 347 46.7
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 3.0e-78 296.2 345 50.7
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 3.9e-78 295.8 345 50.7
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 8.7e-78 294.7 308 51.6
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.1e-77 294.3 313 48.9
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.3e-77 291.6 295 56.9
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 2.8e-76 289.7 368 45.1
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 2.8e-76 289.7 351 50.4
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 3.6e-76 289.3 385 47.0
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 3.6e-76 289.3 377 45.6
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 3.1e-75 286.2 311 53.1
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.2e-74 284.3 324 50.3
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 2.0e-74 283.5 353 45.9
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.7e-73 280.4 338 52.4
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 6.4e-73 278.5 328 50.9
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.9e-72 276.9 310 48.7
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 1.6e-68 263.8 326 47.9
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.4e-67 260.0 267 58.1
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.5e-66 257.3 316 48.4
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 5.8e-66 255.4 299 47.8
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 1.0e-57 228.0 318 43.7
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.7e-57 227.3 306 41.8
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 2.3e-54 216.9 323 40.9
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 2.4e-51 206.8 352 40.6
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 4.1e-51 206.1 199 62.3
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.1e-51 206.1 318 38.7
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 9.0e-51 204.9 352 37.8
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 6.5e-49 198.7 127 72.4
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.4e-46 191.0 228 45.6
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.4e-46 191.0 131 69.5
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 2.3e-46 190.3 392 33.4
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.6e-42 176.8 327 38.8
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.9e-41 173.3 152 60.5
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 2.6e-37 160.2 158 48.1
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 7.2e-32 142.1 299 35.5
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.7e-28 129.8 315 30.2
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 7.0e-27 125.6 314 29.3
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 7.0e-27 125.6 298 30.9
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.5e-24 117.9 132 46.2
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 3.6e-23 113.2 324 27.5
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.6e-21 107.1 107 50.5
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 3.8e-17 93.2 157 37.6
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.0e-14 85.1 220 34.1
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 1.6e-10 71.2 60 55.0
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 1.5e-08 64.7 93 39.8
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 9.5e-08 62.0 165 29.7
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 6.1e-07 59.3 107 34.6


User provided reference genes

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