Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G248850 Glycine max HOM05D011108 ORTHO05D002335 1.6e-66 255.8 113 100.0
Glyma.06G322900 Glycine max HOM05D065522 ORTHO05D002335 3.0e-12 75.5 62 53.2
Lalb_Chr18g0059261 Lupinus albus HOM05D011108 ORTHO05D002335 3.9e-12 75.1 108 35.2
Lalb_Chr12g0196281 Lupinus albus HOM05D011108 ORTHO05D010885 9.5e-11 70.5 96 35.4
Medtr6g009360 Medicago truncatula HOM05D002545 ORTHO05D002335 8.1e-10 67.4 91 35.2
HanXRQChr09g0254861 Helianthus annuus HOM05D000003 ORTHO05D000004 1.8e-09 66.2 112 35.7
TPR.G14763 Trifolium pratense HOM05D015915 ORTHO05D017839 2.3e-09 65.9 102 27.5
LjContig00155g0012392 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-09 65.1 118 32.2
TPR.G37075 Trifolium pratense HOM05D000003 ORTHO05D002335 5.2e-09 64.7 93 37.6
Lalb_Chr03g0037571 Lupinus albus HOM05D011108 ORTHO05D002335 6.8e-09 64.3 100 29.0
ECA234G4526 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-08 62.8 103 32.0
arahy.Tifrunner.gnm1.ann1.K9ADIX Arachis hypogaea HOM05D000003 ORTHO05D000004 2.6e-08 62.4 106 34.0
TPR.G40225 Trifolium pratense HOM05D000003 ORTHO05D000004 4.4e-08 61.6 102 34.3
ECA246G3612 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.9e-08 60.5 102 30.4
Phvul.007G027800 Phaseolus vulgaris HOM05D009310 ORTHO05D010885 9.9e-08 60.5 103 30.1
HanXRQChr05g0129651 Helianthus annuus HOM05D000003 ORTHO05D002335 1.3e-07 60.1 109 32.1
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 2.2e-07 59.3 88 30.7
HanXRQChr11g0342611 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-07 58.9 120 30.8
Glyma.01G182350 Glycine max HOM05D002545 ORTHO05D046754 3.7e-07 58.5 101 27.7
Gorai.013G240100 Gossypium raimondii HOM05D008457 ORTHO05D011002 3.7e-07 58.5 100 28.0
Sopen07g017840 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-07 58.5 103 34.0
TPR.G10611 Trifolium pratense HOM05D001713 ORTHO05D001669 3.7e-07 58.5 90 31.1
HanXRQChr13g0387241 Helianthus annuus HOM05D000003 ORTHO05D000004 4.9e-07 58.2 99 29.3
ECA236G1963 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.4e-07 57.8 99 33.3
Glyma.05G143850 Glycine max HOM05D013446 ORTHO05D017041 6.4e-07 57.8 85 30.6
Medtr5g007390 Medicago truncatula HOM05D000003 ORTHO05D002335 6.4e-07 57.8 85 35.3
Atru.chr6.296 Acer truncatum HOM05D000003 ORTHO05D002259 1.1e-06 57.0 104 26.0
TPR.G11793 Trifolium pratense HOM05D002545 ORTHO05D002335 1.1e-06 57.0 86 32.6
ECA236G2457 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 56.6 92 31.5
HanXRQChr05g0162321 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 108 27.8
HanXRQChr11g0345661 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 108 27.8
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 108 27.8
HanXRQChr08g0227851 Helianthus annuus HOM05D000003 ORTHO05D000004 1.9e-06 56.2 104 32.7
PGSC0003DMG400031219 Solanum tuberosum HOM05D000003 ORTHO05D000283 1.9e-06 56.2 105 31.4
HanXRQChr12g0376001 Helianthus annuus HOM05D000003 ORTHO05D000004 2.4e-06 55.8 103 28.2
PSO133G0054 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-06 55.8 102 31.4
Phvul.011G175900 Phaseolus vulgaris HOM05D009310 ORTHO05D010885 2.4e-06 55.8 73 28.8
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 3.2e-06 55.5 93 24.7
PSO782G0102 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 55.5 94 34.0
ECA233G0347 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.1e-06 55.1 98 29.6
ECA246G3084 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.1e-06 55.1 104 31.7
HanXRQChr02g0058661 Helianthus annuus HOM05D000003 ORTHO05D000004 4.1e-06 55.1 107 30.8
PGSC0003DMG400005322 Solanum tuberosum HOM05D000003 ORTHO05D000283 4.1e-06 55.1 105 28.6
Hund06713 Selenicereus undatus HOM05D003675 ORTHO05D004318 5.4e-06 54.7 92 31.5
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 7.1e-06 54.3 108 27.8
PSO339G3314 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 54.3 100 30.0
Hund13413 Selenicereus undatus HOM05D000003 ORTHO05D000004 9.2e-06 53.9 92 31.5


User provided reference genes

Program Settings