Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 4.9e-199 697.6 348 100.0
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.8e-137 493.0 329 77.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 7.7e-136 487.6 325 77.5
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 8.5e-119 431.0 311 71.4
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-116 424.1 331 66.8
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 6.8e-116 421.4 319 67.1
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.8e-105 386.7 331 60.7
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 1.2e-101 374.0 222 87.4
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.8e-100 370.2 301 65.1
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.2e-99 367.5 322 58.7
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 1.5e-99 367.1 303 61.7
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.0e-99 366.7 321 58.9
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 4.9e-98 362.1 338 55.6
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.4e-97 360.5 321 60.1
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.0e-96 356.7 325 58.2
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.7e-96 356.3 312 61.2
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 4.6e-96 355.5 317 57.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.7e-95 353.6 302 62.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.7e-95 353.6 321 57.6
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 3.9e-95 352.4 302 61.9
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-94 350.9 303 61.1
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.5e-94 349.7 303 60.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.5e-94 349.7 326 57.7
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 3.3e-94 349.4 334 57.8
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.3e-94 349.4 301 61.1
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 5.6e-94 348.6 298 59.1
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.6e-93 347.1 341 58.4
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.6e-93 347.1 306 59.5
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.6e-93 347.1 332 56.9
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.1e-93 346.7 332 54.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 3.6e-93 345.9 303 59.4
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.8e-92 343.6 331 53.5
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.3e-92 343.2 303 60.1
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 3.1e-92 342.8 300 60.0
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 4.0e-92 342.4 335 56.7
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 4.0e-92 342.4 298 61.4
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 4.0e-92 342.4 302 59.9
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.5e-91 340.5 292 58.9
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 2.6e-91 339.7 303 58.7
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 5.8e-91 338.6 355 52.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.5e-91 338.2 350 54.0
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 4.1e-89 332.4 297 56.9
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 4.1e-89 332.4 297 58.6
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 5.4e-89 332.0 300 56.7
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.6e-88 330.5 300 58.0
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.7e-88 329.7 322 53.1
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 3.5e-88 329.3 293 56.0
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.5e-88 329.3 291 58.4
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.0e-87 326.2 311 53.1
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.1e-84 317.8 301 53.5
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.4e-84 317.4 326 51.5
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.8e-84 317.0 329 52.9
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 2.3e-84 316.6 305 54.4
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 5.2e-84 315.5 327 51.4
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.2e-83 314.3 326 50.9
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.0e-83 313.5 290 54.8
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 3.4e-83 312.8 297 53.9
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 3.4e-83 312.8 326 50.6
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.9e-81 307.0 323 50.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.4e-81 306.6 302 52.6
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 4.1e-81 305.8 263 57.4
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.1e-80 303.5 315 50.2
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 2.7e-80 303.1 323 49.5
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 6.6e-79 298.5 306 50.0
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 7.3e-78 295.0 323 48.0
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.6e-77 292.7 306 48.7
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 6.2e-77 292.0 306 50.3
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 8.1e-77 291.6 353 45.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.2e-75 287.7 331 46.5
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.5e-75 287.3 310 50.0
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.6e-75 286.6 331 46.5
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 3.4e-75 286.2 317 48.3
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 4.4e-75 285.8 330 47.0
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 9.9e-75 284.6 272 54.8
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.3e-74 284.3 306 49.0
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 2.2e-74 283.5 289 53.3
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 6.4e-74 282.0 349 46.1
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 6.4e-74 282.0 310 48.1
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 6.4e-74 282.0 331 45.6
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 6.4e-74 282.0 331 45.6
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 7.1e-73 278.5 289 50.2
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 3.4e-67 259.6 312 46.8
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 8.4e-66 255.0 259 52.1
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.4e-65 253.4 295 48.5
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.2e-65 253.1 295 48.5
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.3e-63 247.7 325 43.4
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.3e-60 235.7 315 42.5
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.3e-60 235.7 315 42.5
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 5.8e-59 232.3 321 41.7
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 8.4e-58 228.4 291 43.6
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 5.6e-54 215.7 312 39.4
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.4e-52 211.1 195 58.5
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.5e-43 181.0 131 67.2
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.4e-41 174.5 237 40.5
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 5.5e-41 172.6 301 38.2
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.2e-40 171.4 303 36.0
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 3.2e-33 146.7 135 54.8
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 9.4e-33 145.2 72 97.2
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 2.2e-29 134.0 177 41.2
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 3.4e-27 126.7 129 49.6
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 4.2e-17 93.2 325 29.8
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 8.8e-15 85.5 59 69.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.2e-13 80.9 85 44.7
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 3.8e-10 70.1 78 44.9
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 3.2e-09 67.0 36 88.9
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.6e-08 63.5 51 64.7


User provided reference genes

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