Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G084800 Glycine max HOM05D002090 ORTHO05D001923 1.5e-95 352.8 171 100.0
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 4.4e-60 235.0 127 89.0
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 3.2e-58 228.8 121 91.7
Glyma.09G101800 Glycine max HOM05D002090 ORTHO05D001923 1.6e-57 226.5 132 82.6
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 1.6e-54 216.5 121 89.3
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 2.7e-49 199.1 124 79.0
Glyma.07G223800 Glycine max HOM05D002090 ORTHO05D001923 1.4e-45 186.8 120 77.5
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 8.9e-45 184.1 124 70.2
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 2.0e-44 183.0 121 67.8
Glyma.16G116932 Glycine max HOM05D002090 ORTHO05D001923 4.4e-44 181.8 121 71.1
Glyma.05G078700 Glycine max HOM05D002090 ORTHO05D001923 6.4e-43 177.9 121 66.9
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 1.1e-42 177.2 120 70.0
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 2.4e-42 176.0 149 59.1
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 4.2e-42 175.3 139 64.7
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 1.2e-41 173.7 121 67.8
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 6.0e-41 171.4 132 62.9
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 2.3e-40 169.5 121 66.1
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 2.3e-40 169.5 121 66.1
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 3.0e-40 169.1 122 67.2
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 8.7e-40 167.5 121 65.3
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 1.9e-39 166.4 127 62.2
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 1.9e-39 166.4 121 64.5
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 7.3e-39 164.5 121 63.6
Glyma.13G074000 Glycine max HOM05D002090 ORTHO05D001923 3.6e-38 162.2 93 82.8
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 1.5e-31 140.2 121 59.5
Glyma.13G075500 Glycine max HOM05D002090 ORTHO05D001923 5.6e-31 138.3 105 66.7
Glyma.02G182000 Glycine max HOM05D002090 ORTHO05D001923 7.3e-31 137.9 110 63.6
Glyma.09G082601 Glycine max HOM05D002090 ORTHO05D001923 7.9e-25 117.9 63 82.5
Glyma.15G206600 Glycine max HOM05D002090 ORTHO05D001923 1.3e-22 110.5 100 59.0
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 4.0e-21 105.5 122 40.2
Glyma.10G108140 Glycine max HOM05D002090 ORTHO05D001923 3.4e-20 102.4 70 67.1
Glyma.06G126350 Glycine max HOM05D002090 ORTHO05D001923 1.7e-19 100.1 120 37.5
Glyma.16G114500 Glycine max HOM05D002090 ORTHO05D001923 1.9e-18 96.7 64 68.8
Lalb_Chr25g0280991 Lupinus albus HOM05D002090 ORTHO05D001923 4.2e-18 95.5 122 41.0
Glyma.15G196550 Glycine max HOM05D002090 ORTHO05D001923 1.2e-17 94.0 63 66.7
Lalb_Chr02g0157091 Lupinus albus HOM05D002090 ORTHO05D001923 6.0e-17 91.7 123 35.8
Lalb_Chr05g0225681 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-16 89.4 129 38.8
TPR.G27142 Trifolium pratense HOM05D002090 ORTHO05D001923 3.0e-16 89.4 101 39.6
Glyma.09G126850 Glycine max HOM05D002090 ORTHO05D001923 2.1e-14 83.2 143 35.7
Lalb_Chr13g0293791 Lupinus albus HOM05D002090 ORTHO05D001923 8.2e-14 81.3 99 38.4
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 5.3e-13 78.6 114 29.8
Lalb_Chr06g0171231 Lupinus albus HOM05D002090 ORTHO05D001923 9.0e-13 77.8 98 36.7
Glyma.08G267300 Glycine max HOM05D002090 ORTHO05D001923 1.2e-12 77.4 53 69.8
Glyma.03G056600 Glycine max HOM05D002090 ORTHO05D001923 2.0e-12 76.6 48 72.9
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 3.4e-12 75.9 119 32.8
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 4.5e-12 75.5 97 35.1
Psat5g183760 Pisum sativum HOM05D015378 ORTHO05D015180 7.6e-12 74.7 114 30.7
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 1.3e-11 73.9 106 34.0
Psat5g067440 Pisum sativum HOM05D002090 ORTHO05D001923 1.3e-11 73.9 99 38.4
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 1.3e-11 73.9 140 31.4
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 2.2e-11 73.2 111 30.6
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-10 70.9 94 35.1
Psat1g020520 Pisum sativum HOM05D012348 ORTHO05D012889 1.4e-10 70.5 93 36.6
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-10 70.5 108 33.3
Lj4g0014236 Lotus japonicus HOM05D002090 ORTHO05D020767 1.9e-10 70.1 92 33.7
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 2.5e-10 69.7 115 28.7
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 3.2e-10 69.3 115 28.7
TPR.G15924 Trifolium pratense HOM05D000096 ORTHO05D000045 3.2e-10 69.3 118 30.5
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 5.5e-10 68.6 110 30.0
Psat7g184560 Pisum sativum HOM05D002090 ORTHO05D001923 3.5e-09 65.9 73 42.5
Psat5g186520 Pisum sativum HOM05D002090 ORTHO05D001923 6.1e-09 65.1 97 38.1
Lalb_Chr11g0072781 Lupinus albus HOM05D002090 ORTHO05D001923 1.8e-08 63.5 91 31.9
Medtr1g062890 Medicago truncatula HOM05D002090 ORTHO05D001923 3.9e-08 62.4 111 30.6
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 6.7e-08 61.6 110 30.9
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 8.7e-08 61.2 125 29.6
Medtr4g085760 Medicago truncatula HOM05D002090 ORTHO05D001923 1.1e-07 60.8 99 32.3
TPR.G150 Trifolium pratense HOM05D002090 ORTHO05D026072 1.1e-07 60.8 64 40.6
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 1.9e-07 60.1 99 28.3
TPR.G626 Trifolium pratense HOM05D002090 ORTHO05D001923 2.5e-07 59.7 107 28.0
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 3.3e-07 59.3 123 26.0
Medtr3g082920 Medicago truncatula HOM05D000168 ORTHO05D048861 7.4e-07 58.2 102 32.4
arahy.Tifrunner.gnm1.ann1.D5SYT8 Arachis hypogaea HOM05D002441 ORTHO05D002376 9.7e-07 57.8 123 30.1
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 9.7e-07 57.8 123 26.0
TPR.G39946 Trifolium pratense HOM05D002090 ORTHO05D001923 1.3e-06 57.4 93 30.1
Glyma.15G243900 Glycine max HOM05D002090 ORTHO05D001923 1.6e-06 57.0 41 65.9
Psat1g188080 Pisum sativum HOM05D002090 ORTHO05D001923 3.7e-06 55.8 100 33.0
Psat2g105560 Pisum sativum HOM05D039230 ORTHO05D001923 4.8e-06 55.5 86 32.6


User provided reference genes

Program Settings