Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G084375 Glycine max HOM05D004182 ORTHO05D010127 1.4e-56 222.6 108 100.0
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 1.9e-24 115.9 94 67.0
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 2.5e-24 115.5 108 60.2
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 3.2e-24 115.2 107 59.8
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 1.8e-22 109.4 104 58.7
C04p22500 Brassica napus HOM05D004182 ORTHO05D010127 1.8e-22 109.4 107 58.9
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 5.7e-21 104.4 106 56.6
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 1.5e-18 96.3 79 64.6
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 2.2e-17 92.4 56 78.6
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 2.5e-16 89.0 101 53.5
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 2.5e-16 89.0 101 53.5
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 2.5e-16 89.0 101 53.5
BraSC59t46507Z Brassica rapa HOM05D004182 ORTHO05D010127 2.5e-16 89.0 101 53.5
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 2.5e-16 89.0 101 51.5
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BolSC44t60815H Brassica oleracea HOM05D004182 ORTHO05D010127 3.2e-16 88.6 100 53.0
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BraSC103t45434Z Brassica rapa HOM05D004182 ORTHO05D010127 3.2e-16 88.6 100 53.0
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BraSC25t45903Z Brassica rapa HOM05D004182 ORTHO05D010127 3.2e-16 88.6 100 53.0
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 3.2e-16 88.6 100 53.0
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.2e-16 88.2 56 76.8
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.2e-16 88.2 56 76.8
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.1e-15 85.9 56 75.0
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.6e-15 85.1 56 73.2
Hma1.2p1_0594F.1_g185814 Hydrangea macrophylla HOM05D004182 ORTHO05D010127 3.0e-14 82.0 43 88.4
Hma1.2p1_3221F.1_g334073 Hydrangea macrophylla HOM05D004182 ORTHO05D010127 3.0e-14 82.0 43 88.4
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 3.9e-14 81.6 54 72.2
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 3.9e-14 81.6 57 66.7
Gorai.007G150800 Gossypium raimondii HOM05D001966 ORTHO05D010127 5.2e-14 81.3 56 71.4
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 5.2e-14 81.3 61 65.6
Cpa.g.sc120.41 Carica papaya HOM05D001966 ORTHO05D010127 8.8e-14 80.5 77 58.4
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 2.6e-13 79.0 57 70.2
Gohir.D11G140550 Gossypium hirsutum HOM05D001966 ORTHO05D010127 7.4e-13 77.4 56 67.9
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.3e-12 76.6 50 74.0
arahy.Tifrunner.gnm1.ann1.CSY78X Arachis hypogaea HOM05D000216 ORTHO05D000634 2.2e-12 75.9 41 85.4
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.7e-12 75.1 51 68.6
Gorai.011G180000 Gossypium raimondii HOM05D001966 ORTHO05D010127 4.8e-12 74.7 56 66.1
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 6.3e-12 74.3 46 76.1
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 8.2e-12 73.9 56 64.3
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 5.3e-11 71.2 54 66.7
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.2e-10 70.1 49 73.5
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.6e-10 69.7 95 47.4
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 1.6e-10 69.7 57 63.2
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 7.7e-10 67.4 54 63.0
SEGI_32360 Sequoiadendron giganteum HOM05D004182 ORTHO05D010127 2.2e-09 65.9 45 71.1
Gohir.D11G306003 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.8e-09 65.1 45 68.9
Gorai.007G326200 Gossypium raimondii HOM05D001966 ORTHO05D010127 3.8e-09 65.1 45 68.9
SEGI_11050 Sequoiadendron giganteum HOM05D004182 ORTHO05D010127 8.5e-09 63.9 44 70.5
Phvul.008G246600 Phaseolus vulgaris HOM05D001966 ORTHO05D010127 4.7e-07 58.2 44 68.2
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 4.0e-06 55.1 57 54.4
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 6.7e-06 54.3 35 74.3


User provided reference genes

Program Settings