Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G081451 Glycine max HOM05D004408 ORTHO05D005486 1.1e-50 203.0 100 100.0
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 3.9e-32 141.4 70 94.3
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 1.1e-31 139.8 70 92.9
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 1.1e-31 139.8 70 92.9
Lj7A478T84 Lonicera japonica HOM05D004408 ORTHO05D005486 1.1e-31 139.8 70 92.9
Haze_04313 Corylus avellana HOM05D004408 ORTHO05D005486 2.5e-31 138.7 70 91.4
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 4.3e-31 137.9 70 91.4
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 4.3e-31 137.9 70 91.4
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.3e-31 137.9 70 91.4
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 4.3e-31 137.9 70 92.9
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 4.3e-31 137.9 70 91.4
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 4.3e-31 137.9 70 92.9
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 4.3e-31 137.9 71 91.5
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 5.6e-31 137.5 70 90.0
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 5.6e-31 137.5 70 90.0
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 7.3e-31 137.1 70 91.4
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 9.6e-31 136.7 70 91.4
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 9.6e-31 136.7 70 91.4
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 9.6e-31 136.7 70 90.0
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 1.3e-30 136.3 70 91.4
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 1.3e-30 136.3 70 90.0
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 1.3e-30 136.3 70 90.0
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 1.6e-30 136.0 70 91.4
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.1e-30 135.6 70 90.0
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 2.1e-30 135.6 70 88.6
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 2.1e-30 135.6 70 88.6
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 2.1e-30 135.6 70 90.0
QL08p006198 Quercus lobata HOM05D004408 ORTHO05D005486 2.1e-30 135.6 70 90.0
FAN05G3761 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.8e-30 135.2 70 90.0
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 2.8e-30 135.2 70 87.1
vmacro19678 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 2.8e-30 135.2 70 88.6
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 4.8e-30 134.4 70 88.6
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 4.8e-30 134.4 70 88.6
Peaxi162Scf01040g00010 Petunia axillaris HOM05D004408 ORTHO05D005486 8.1e-30 133.7 70 88.6
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 1.1e-29 133.3 70 87.1
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 1.1e-29 133.3 70 87.1
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 1.4e-29 132.9 70 88.6
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 1.8e-29 132.5 70 87.1
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 1.8e-29 132.5 70 87.1
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 2.4e-29 132.1 70 84.3
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 2.4e-29 132.1 70 85.7
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 2.4e-29 132.1 70 87.1
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 3.1e-29 131.7 70 87.1
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 4.0e-29 131.3 70 87.1
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 4.0e-29 131.3 70 85.7
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 5.3e-29 131.0 70 84.3
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 5.3e-29 131.0 70 84.3
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 5.3e-29 131.0 70 85.7
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 5.3e-29 131.0 70 85.7
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 5.3e-29 131.0 70 85.7
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 6.9e-29 130.6 70 88.6
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 9.0e-29 130.2 70 82.9
Nitab4.5_0000921g0010 Nicotiana tabacum HOM05D004408 ORTHO05D005486 9.0e-29 130.2 69 87.0
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 1.2e-28 129.8 70 87.1
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea HOM05D004408 ORTHO05D005486 1.2e-28 129.8 70 87.1
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 1.5e-28 129.4 70 85.7
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 1.5e-28 129.4 70 85.7
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 1.5e-28 129.4 70 84.3
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 1.5e-28 129.4 70 85.7
Cpa.g.sc117.51 Carica papaya HOM05D004408 ORTHO05D005486 2.0e-28 129.0 70 85.7
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 2.0e-28 129.0 70 85.7
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 2.6e-28 128.6 70 82.9
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 2.6e-28 128.6 70 84.3
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 2.6e-28 128.6 70 82.9
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.4e-28 128.3 70 85.7
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 5.8e-28 127.5 70 84.3
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 5.8e-28 127.5 70 84.3
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 1.3e-27 126.3 70 82.9
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 1.3e-27 126.3 70 84.3
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 1.3e-27 126.3 70 81.4
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 1.7e-27 125.9 70 82.9
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 1.7e-27 125.9 70 81.4
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 1.7e-27 125.9 70 81.4
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 1.7e-27 125.9 70 81.4
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 1.7e-27 125.9 70 81.4
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 1.7e-27 125.9 70 81.4
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
CARHR185700 Cardamine hirsuta HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 2.2e-27 125.6 70 81.4
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 2.9e-27 125.2 70 81.4
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 3.8e-27 124.8 70 81.4
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 3.8e-27 124.8 70 80.0
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 3.8e-27 124.8 70 80.0
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 4.9e-27 124.4 70 81.4
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 4.9e-27 124.4 70 80.0
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 8.4e-27 123.6 70 80.0
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 1.1e-26 123.2 70 78.6
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 1.1e-26 123.2 70 78.6
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 1.9e-26 122.5 70 78.6
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 3.2e-26 121.7 70 78.6
Zm00001eb151850 Zea mays HOM05D004408 ORTHO05D005486 3.2e-26 121.7 70 78.6
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 4.2e-26 121.3 70 78.6
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 4.2e-26 121.3 70 77.1
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 9.3e-26 120.2 70 77.1
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 9.3e-26 120.2 70 77.1
SGA_v2.0_scaffold221G42679 Striga asiatica HOM05D004408 ORTHO05D005486 3.9e-24 114.8 61 83.6
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 5.1e-24 114.4 70 72.9
HPP92_012130 Vanilla planifolia HOM05D004408 ORTHO05D005486 5.1e-24 114.4 70 71.4
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 8.7e-24 113.6 70 70.0
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 5.6e-23 110.9 70 74.3
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 7.3e-23 110.5 70 68.6
HPP92_012122 Vanilla planifolia HOM05D004408 ORTHO05D005486 1.4e-21 106.3 63 74.6
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 2.4e-21 105.5 70 64.3
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 1.2e-17 93.2 70 55.7
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 3.5e-17 91.7 82 51.2
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 6.0e-17 90.9 70 54.3
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 2.3e-16 89.0 70 58.6
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 9.6e-15 83.6 70 48.6


User provided reference genes

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