Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G080200 Glycine max HOM05D025134 ORTHO05D020753 3.0e-162 575.5 366 100.0
Phvul.004G052600 Phaseolus vulgaris HOM05D025134 ORTHO05D020753 7.9e-107 391.3 370 62.4
VMungo0464G1428 Vigna mungo HOM05D025134 ORTHO05D020753 2.2e-93 346.7 372 58.6
Glyma.19G067500 Glycine max HOM05D025134 ORTHO05D020753 6.5e-77 292.0 313 78.9
Glyma.19G067550 Glycine max HOM05D025134 ORTHO05D020753 5.6e-52 209.1 139 82.0
Ca_08339_v3 Cicer arietinum L. HOM05D007561 ORTHO05D007661 1.8e-26 124.4 335 35.2
Psat3g083040 Pisum sativum HOM05D007561 ORTHO05D007661 2.4e-23 114.0 356 33.4
Medtr7g088200 Medicago truncatula HOM05D007561 ORTHO05D007661 3.9e-21 106.7 336 33.0
Glyma.19G123300 Glycine max HOM05D007561 ORTHO05D007661 7.3e-20 102.4 346 30.9
Lj1g0025432 Lotus japonicus HOM05D007561 ORTHO05D007661 7.3e-20 102.4 351 36.2
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 1.6e-19 101.3 332 31.9
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 1.1e-18 98.6 369 29.0
Glyma.03G118900 Glycine max HOM05D007561 ORTHO05D007661 1.4e-18 98.2 343 31.8
Lalb_Chr22g0358291 Lupinus albus HOM05D007561 ORTHO05D007661 2.6e-17 94.0 341 31.1
TPR.G23681 Trifolium pratense HOM05D007561 ORTHO05D007661 1.0e-13 82.0 288 31.9
Medtr6g026850 Medicago truncatula HOM05D048560 ORTHO05D020753 2.3e-13 80.9 302 36.1
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 2.3e-13 80.9 339 27.7
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 7.3e-12 75.9 286 29.7
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 3.6e-11 73.6 412 26.7
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 1.1e-10 72.0 269 31.6
Atru.chr8.931 Acer truncatum HOM05D007561 ORTHO05D007661 2.4e-10 70.9 374 27.3
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 3.1e-10 70.5 344 27.3
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 9.0e-10 68.9 346 27.2
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 2.6e-09 67.4 341 27.0
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 9.9e-09 65.5 304 30.3
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 2.2e-08 64.3 347 25.9
QL02p091854 Quercus lobata HOM05D007561 ORTHO05D007661 3.8e-08 63.5 334 26.3
SGA_v2.0_scaffold66G22349 Striga asiatica HOM05D007561 ORTHO05D007661 8.4e-08 62.4 231 29.9
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 1.1e-07 62.0 234 29.5
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 1.4e-07 61.6 303 29.4
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 1.4e-07 61.6 386 25.1
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 2.4e-07 60.8 234 29.1
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 3.2e-07 60.5 388 24.5
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 4.2e-07 60.1 344 25.3
Sed0023829 Sechium edule HOM05D007561 ORTHO05D007661 5.4e-07 59.7 260 30.8
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 9.3e-07 58.9 293 26.6
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla HOM05D007561 ORTHO05D007661 1.2e-06 58.5 252 25.8
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 1.2e-06 58.5 372 24.2
PGR042G3351 Punica granatum HOM05D007561 ORTHO05D007661 1.2e-06 58.5 268 28.0
MELO3C009692.2 Cucumis melo HOM05D007561 ORTHO05D007661 1.6e-06 58.2 362 26.8
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 2.1e-06 57.8 237 28.3
ClCG10G016860 Citrullus lanatus HOM05D007561 ORTHO05D007661 2.7e-06 57.4 362 27.1
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 2.7e-06 57.4 262 27.5
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 2.7e-06 57.4 387 24.5
CsaV3_3G039500 Cucumis sativus L. HOM05D007561 ORTHO05D007661 3.5e-06 57.0 373 25.2
Gohir.A05G393000 Gossypium hirsutum HOM05D007561 ORTHO05D007661 4.6e-06 56.6 234 27.4
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 6.0e-06 56.2 237 27.8
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 6.0e-06 56.2 326 25.8
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 6.0e-06 56.2 299 30.1


User provided reference genes

Program Settings