Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.2e-118 429.9 213 100.0
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.2e-102 376.7 201 91.5
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.2e-99 366.7 204 89.2
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 3.9e-98 361.7 206 85.9
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 5.1e-98 361.3 205 86.8
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 2.8e-96 355.5 215 83.3
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 2.0e-94 349.4 212 82.1
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.3e-93 346.7 207 82.6
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 4.9e-93 344.7 207 81.6
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 9.3e-92 340.5 201 82.1
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.2e-91 340.1 208 82.2
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.7e-91 339.0 208 80.8
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 2.7e-91 339.0 206 80.1
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 3.5e-91 338.6 209 81.8
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 6.0e-91 337.8 210 79.5
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.3e-90 336.7 208 79.8
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.3e-90 335.9 208 80.3
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.3e-90 335.9 208 80.3
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.3e-90 335.9 208 81.2
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 2.3e-90 335.9 211 79.6
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.9e-90 335.1 204 80.4
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 3.9e-90 335.1 209 80.4
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 5.1e-90 334.7 212 79.2
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 6.7e-90 334.3 204 77.5
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 6.7e-90 334.3 208 79.3
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 8.7e-90 334.0 208 79.8
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 8.7e-90 334.0 209 80.4
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.5e-89 333.2 208 79.8
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.9e-89 332.8 210 79.0
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.9e-89 332.8 203 81.3
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 4.3e-89 331.6 207 78.3
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 5.6e-89 331.3 208 77.9
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.6e-89 331.3 208 80.8
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.6e-89 331.3 212 78.3
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 7.4e-89 330.9 206 78.2
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.6e-88 329.7 210 78.6
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 1.6e-88 329.7 208 79.3
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 2.1e-88 329.3 207 77.3
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 2.8e-88 328.9 208 77.9
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 3.7e-88 328.6 209 78.9
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 3.7e-88 328.6 208 76.9
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 3.7e-88 328.6 210 78.1
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 4.8e-88 328.2 206 79.1
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 6.2e-88 327.8 201 78.1
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 6.2e-88 327.8 207 76.3
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 6.2e-88 327.8 207 77.8
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.1e-87 327.0 209 76.6
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.1e-87 327.0 210 76.7
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.4e-87 326.6 208 77.4
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 2.4e-87 325.9 212 75.5
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.4e-87 325.9 209 76.6
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 2.4e-87 325.9 210 77.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.4e-87 325.9 208 77.9
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 2.4e-87 325.9 209 77.5
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 3.1e-87 325.5 207 77.8
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 4.0e-87 325.1 208 76.9
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 6.9e-87 324.3 210 77.1
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.0e-86 322.8 209 74.2
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 3.4e-86 322.0 205 75.6
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 3.4e-86 322.0 205 75.6
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 4.5e-86 321.6 217 73.7
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 7.6e-86 320.9 231 72.3
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.0e-85 320.5 168 91.1
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.3e-85 320.1 210 76.7
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 1.7e-85 319.7 241 68.0
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 2.2e-85 319.3 205 76.1
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 3.8e-85 318.5 209 75.6
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 6.5e-85 317.8 205 75.1
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 6.5e-85 317.8 206 76.2
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 8.4e-85 317.4 205 74.1
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 8.4e-85 317.4 205 74.1
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 8.4e-85 317.4 207 75.4
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.1e-84 317.0 205 74.1
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.1e-84 317.0 205 74.1
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.4e-84 316.6 205 77.6
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 1.4e-84 316.6 204 75.0
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.9e-84 316.2 207 74.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 3.2e-84 315.5 220 72.7
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 5.5e-84 314.7 205 73.7
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 2.7e-83 312.4 205 74.1
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 6.0e-83 311.2 208 76.4
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 2.3e-82 309.3 209 73.7
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.0e-82 308.9 207 73.9
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 5.1e-82 308.1 228 67.5
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 8.7e-82 307.4 215 74.9
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.5e-81 305.8 211 72.5
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 3.3e-81 305.4 211 72.5
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 7.4e-81 304.3 229 69.4
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 2.4e-79 299.3 215 68.8
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.6e-78 295.8 206 71.4
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 2.9e-77 292.4 207 72.9
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.9e-76 289.7 231 64.5
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 7.2e-76 287.7 218 69.7
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 1.2e-75 287.0 208 71.2
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 1.0e-74 283.9 207 72.0
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.6e-72 276.6 145 92.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 6.9e-71 271.2 178 71.3
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.2e-69 266.2 218 65.1
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 8.5e-69 264.2 210 66.2
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 3.6e-67 258.8 166 74.1
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.3e-66 256.1 213 64.8
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 8.8e-66 254.2 152 80.3
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.7e-64 250.0 330 47.3
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.8e-64 249.2 215 60.5
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.1e-63 245.7 148 78.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 2.2e-61 239.6 175 66.9
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.9e-61 239.2 149 77.9
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 8.5e-61 237.7 145 83.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 9.7e-57 224.2 156 64.7
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 6.5e-53 211.5 146 63.7
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 9.4e-52 207.6 107 88.8
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 2.7e-46 189.5 189 52.9
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 2.2e-37 159.8 119 65.5
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 2.2e-37 159.8 162 48.8
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.8e-29 132.5 63 95.2
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.0e-25 120.2 63 82.5
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 5.4e-23 112.1 144 46.5
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.3e-21 107.5 74 67.6
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.7e-21 107.1 118 50.8
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.6e-20 102.1 89 61.8
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.4e-18 97.4 54 92.6
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 2.1e-06 57.0 45 62.2


User provided reference genes

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