Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 7.4e-59 230.3 116 100.0
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 5.9e-48 194.1 148 72.3
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 3.8e-47 191.4 108 88.9
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 5.0e-47 191.0 108 89.8
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 3.2e-46 188.3 108 88.0
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 7.2e-46 187.2 106 89.6
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.2e-45 186.4 108 86.1
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.6e-45 186.0 108 87.0
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 1.6e-45 186.0 108 86.1
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.6e-45 186.0 106 88.7
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 2.1e-45 185.7 108 86.1
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 2.7e-45 185.3 108 85.2
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 2.7e-45 185.3 108 85.2
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 6.1e-45 184.1 108 84.3
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 6.1e-45 184.1 108 85.2
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 7.9e-45 183.7 108 84.3
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 7.9e-45 183.7 108 84.3
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 85.2
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 86.1
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 85.2
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 85.2
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 84.3
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 84.3
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.0e-44 183.3 108 84.3
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.4e-44 183.0 108 86.1
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.4e-44 183.0 108 84.3
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.8e-44 182.6 107 86.9
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.8e-44 182.6 106 84.9
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.8e-44 182.6 108 83.3
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.3e-44 182.2 108 83.3
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 3.9e-44 181.4 108 84.3
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 6.7e-44 180.6 108 84.3
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 8.8e-44 180.3 108 82.4
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 1.1e-43 179.9 108 82.4
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 1.1e-43 179.9 108 81.5
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.1e-43 179.9 108 85.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.5e-43 179.5 108 83.3
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 1.5e-43 179.5 108 82.4
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.5e-43 179.5 108 84.3
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.5e-43 178.7 108 84.3
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 3.3e-43 178.3 108 80.6
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 3.3e-43 178.3 108 83.3
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.3e-43 177.9 108 80.6
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 4.3e-43 177.9 108 81.5
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 4.3e-43 177.9 108 81.5
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 7.4e-43 177.2 108 85.2
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 7.4e-43 177.2 108 82.4
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 7.4e-43 177.2 108 83.3
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 9.7e-43 176.8 108 82.4
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 9.7e-43 176.8 106 83.0
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 9.7e-43 176.8 108 81.5
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.3e-42 176.4 108 81.5
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.7e-42 176.0 108 79.6
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 2.2e-42 175.6 108 78.7
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 2.2e-42 175.6 106 82.1
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.2e-42 175.6 108 79.6
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.2e-42 175.6 108 79.6
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 2.2e-42 175.6 108 82.4
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 3.7e-42 174.9 108 81.5
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 3.7e-42 174.9 108 77.8
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.7e-42 174.9 108 78.7
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 3.7e-42 174.9 106 81.1
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 4.8e-42 174.5 108 81.5
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 4.8e-42 174.5 108 82.4
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 4.8e-42 174.5 108 81.5
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 6.3e-42 174.1 108 77.8
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.1e-41 173.3 108 80.6
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.1e-41 173.3 108 78.7
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 1.1e-41 173.3 108 80.6
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.4e-41 172.9 108 79.6
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 1.4e-41 172.9 108 80.6
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.8e-41 172.6 108 78.7
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.8e-41 172.6 105 82.9
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.8e-41 172.6 105 82.9
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.4e-41 172.2 108 76.9
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 2.4e-41 172.2 108 76.9
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 2.4e-41 172.2 108 76.9
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 4.1e-41 171.4 108 78.7
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 4.1e-41 171.4 106 78.3
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 5.3e-41 171.0 108 75.9
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 5.3e-41 171.0 108 77.8
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 9.1e-41 170.2 100 84.0
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 9.1e-41 170.2 108 75.9
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.2e-40 169.9 108 78.7
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 2.0e-40 169.1 108 75.0
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 2.0e-40 169.1 108 75.0
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 2.0e-40 169.1 108 75.0
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.0e-40 169.1 108 80.6
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 2.0e-40 169.1 108 75.0
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 2.6e-40 168.7 108 75.0
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 2.6e-40 168.7 108 75.0
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 2.6e-40 168.7 108 75.0
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 4.5e-40 167.9 108 76.9
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 1.0e-39 166.8 106 76.4
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 1.3e-39 166.4 108 81.5
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 1.3e-39 166.4 108 75.9
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 2.2e-39 165.6 94 87.2
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 3.8e-39 164.9 108 76.9
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 6.5e-39 164.1 100 81.0
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.6e-37 158.3 129 65.9
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.4e-36 156.4 131 65.6
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.8e-36 156.0 108 75.0
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 3.3e-35 151.8 90 87.8
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 5.7e-35 151.0 95 81.1
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.7e-34 149.4 93 82.8
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 3.7e-34 148.3 92 82.6
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 5.3e-33 144.4 94 72.3
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 3.5e-32 141.7 78 87.2
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 3.8e-31 138.3 78 87.2
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 2.5e-30 135.6 94 72.3
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.2e-30 134.8 76 88.2
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.7e-29 132.1 78 82.1
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.7e-18 96.3 104 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 7.7e-16 87.4 88 50.0
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 2.2e-15 85.9 96 46.9
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 2.2e-15 85.9 83 48.2
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 8.5e-15 84.0 92 47.8
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 2.7e-13 79.0 87 42.5
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.7e-10 69.7 36 91.7
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-06 57.0 78 44.9


User provided reference genes

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