Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 2.5e-78 295.4 157 100.0
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 9.7e-54 213.8 120 93.3
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 3.4e-43 178.7 119 80.7
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 1.0e-42 177.2 119 78.2
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 2.3e-39 166.0 118 77.1
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 2.3e-39 166.0 118 78.0
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 7.4e-38 161.0 117 72.6
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 9.7e-38 160.6 117 71.8
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 1.3e-37 160.2 117 71.8
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 1.3e-37 160.2 117 72.6
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 1.3e-37 160.2 117 72.6
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 2.2e-37 159.5 117 73.5
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 3.7e-37 158.7 118 70.3
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 6.3e-37 157.9 117 70.1
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 6.3e-37 157.9 118 69.5
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 8.2e-37 157.5 117 73.5
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 1.1e-36 157.1 114 72.8
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 1.1e-36 157.1 118 69.5
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.4e-36 156.8 117 70.1
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 1.4e-36 156.8 119 69.7
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 1.4e-36 156.8 142 62.7
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 1.8e-36 156.4 122 68.9
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.8e-36 156.4 118 68.6
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 1.8e-36 156.4 117 71.8
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 2.4e-36 156.0 117 71.8
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 2.4e-36 156.0 117 73.5
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 2.4e-36 156.0 119 68.9
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 3.1e-36 155.6 118 68.6
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 4.1e-36 155.2 117 69.2
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 4.1e-36 155.2 117 70.9
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 5.3e-36 154.8 117 69.2
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 5.3e-36 154.8 117 68.4
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 7.0e-36 154.5 116 67.2
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 7.0e-36 154.5 117 69.2
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 9.1e-36 154.1 117 69.2
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 9.1e-36 154.1 117 68.4
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.2e-35 153.7 117 70.1
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 1.2e-35 153.7 119 68.9
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 1.2e-35 153.7 119 70.6
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 2.0e-35 152.9 117 67.5
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 2.0e-35 152.9 116 67.2
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.6e-35 152.5 114 72.8
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 2.6e-35 152.5 119 65.5
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 2.6e-35 152.5 116 66.4
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 2.6e-35 152.5 117 69.2
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 2.6e-35 152.5 117 67.5
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 2.6e-35 152.5 117 68.4
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.6e-35 152.5 114 71.1
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 3.5e-35 152.1 116 66.4
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 3.5e-35 152.1 116 67.2
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 4.5e-35 151.8 117 68.4
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 4.5e-35 151.8 118 67.8
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 4.5e-35 151.8 113 71.7
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 5.9e-35 151.4 114 71.1
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 7.7e-35 151.0 116 66.4
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 7.7e-35 151.0 117 69.2
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 7.7e-35 151.0 117 69.2
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 7.7e-35 151.0 117 67.5
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 7.7e-35 151.0 114 68.4
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 7.7e-35 151.0 117 67.5
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.3e-34 150.2 116 65.5
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.3e-34 150.2 116 65.5
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.3e-34 150.2 116 65.5
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 1.3e-34 150.2 117 67.5
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.3e-34 150.2 117 65.8
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.7e-34 149.8 119 68.1
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 1.7e-34 149.8 117 65.8
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 2.9e-34 149.1 119 66.4
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 2.9e-34 149.1 114 65.8
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 2.9e-34 149.1 116 70.7
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 2.9e-34 149.1 117 66.7
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 2.9e-34 149.1 119 67.2
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 2.9e-34 149.1 117 66.7
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 3.8e-34 148.7 116 65.5
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 5.0e-34 148.3 119 65.5
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 6.5e-34 147.9 116 65.5
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 6.5e-34 147.9 117 65.8
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 6.5e-34 147.9 114 68.4
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 6.5e-34 147.9 117 65.0
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 8.5e-34 147.5 116 64.7
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 8.5e-34 147.5 114 67.5
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 8.5e-34 147.5 117 65.8
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 1.1e-33 147.1 114 65.8
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 1.1e-33 147.1 117 66.7
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 1.1e-33 147.1 114 65.8
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 3.2e-33 145.6 117 67.5
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 4.2e-33 145.2 114 70.2
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 7.2e-33 144.4 117 65.8
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 1.2e-32 143.7 119 63.9
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 6.1e-32 141.4 117 62.4
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 8.0e-32 141.0 117 66.7
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.0e-32 141.0 117 60.7
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 4.0e-31 138.7 119 63.9
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 3.3e-30 135.6 117 64.1
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 5.7e-30 134.8 114 63.2
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.7e-29 132.1 98 70.4
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 9.1e-28 127.5 114 59.6
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.6e-27 126.7 94 69.1
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 2.0e-27 126.3 117 59.8
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 5.9e-27 124.8 118 55.9
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 5.9e-27 124.8 116 57.8
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 1.3e-26 123.6 114 57.0
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 1.1e-25 120.6 108 63.9
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 3.2e-25 119.0 122 53.3
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 4.2e-25 118.6 119 53.8
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 6.1e-24 114.8 85 71.8
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 3.7e-21 105.5 85 67.1
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.4e-20 103.6 116 50.9
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 8.6e-18 94.4 115 50.4
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.2e-16 90.5 122 45.9
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.8e-07 60.1 75 45.3


User provided reference genes

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