Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G233800 Glycine max HOM05D008056 ORTHO05D009804 5.3e-37 157.1 77 100.0
Glyma.06G131000 Glycine max HOM05D008056 ORTHO05D009804 3.0e-32 141.4 77 90.9
Phvul.009G050700 Phaseolus vulgaris HOM05D008056 ORTHO05D009804 1.7e-27 125.6 79 78.5
Lalb_Chr23g0271651 Lupinus albus HOM05D008056 ORTHO05D009804 4.2e-26 120.9 79 78.5
TPR.G33657 Trifolium pratense HOM05D008056 ORTHO05D009804 2.3e-24 115.2 79 74.7
Medtr3g491850 Medicago truncatula HOM05D008056 ORTHO05D009804 3.0e-24 114.8 78 76.9
arahy.Tifrunner.gnm1.ann1.7U68N5 Arachis hypogaea HOM05D008056 ORTHO05D009804 2.1e-22 108.6 76 68.4
arahy.Tifrunner.gnm1.ann1.I0C4BN Arachis hypogaea HOM05D008056 ORTHO05D009804 1.1e-21 106.3 76 67.1
Psat5g075840 Pisum sativum HOM05D008056 ORTHO05D009804 1.1e-21 106.3 78 71.8
CiPaw.05G198700 Carya illinoinensis HOM05D008056 ORTHO05D009804 4.3e-15 84.3 78 59.0
TWI39G0847 Tripterygium wilfordii HOM05D008056 ORTHO05D009804 9.7e-15 83.2 78 57.7
Atru.chr12.2248 Acer truncatum HOM05D008056 ORTHO05D009804 1.6e-14 82.4 83 59.0
Actinidia34234 Actinidia chinensis HOM05D008056 ORTHO05D009804 6.3e-14 80.5 74 56.8
Haze_00233 Corylus avellana HOM05D008056 ORTHO05D009804 3.1e-13 78.2 77 57.1
Hma1.2p1_0591F.1_g185220 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 4.5e-12 74.3 74 54.1
GSVIVG01038573001 Vitis vinifera HOM05D008056 ORTHO05D009804 5.9e-12 73.9 74 54.1
Actinidia08668 Actinidia chinensis HOM05D008056 ORTHO05D009804 1.3e-11 72.8 74 51.4
Rhsim03G0210900 Rhododendron simsii HOM05D008056 ORTHO05D009804 1.7e-11 72.4 78 56.4
CiPaw.06G044900 Carya illinoinensis HOM05D008056 ORTHO05D009804 1.1e-10 69.7 77 57.1
Potri.012G017400 Populus trichocarpa HOM05D008056 ORTHO05D009804 1.1e-10 69.7 73 56.2
Prupe.2G313800 Prunus persica HOM05D015219 ORTHO05D009804 1.1e-10 69.7 85 55.3
Dinv35348 Davidia involucrata HOM05D008056 ORTHO05D009804 1.9e-10 68.9 75 52.0
QL09p007938 Quercus lobata HOM05D008056 ORTHO05D009804 3.2e-10 68.2 73 56.2
Hma1.2p1_2994F.1_g331390 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 7.2e-10 67.0 76 50.0
Rhsim09G0206700 Rhododendron simsii HOM05D008056 ORTHO05D009804 7.2e-10 67.0 75 57.3
Ciclev10023143m.g Citrus clementina HOM05D008056 ORTHO05D009804 9.4e-10 66.6 78 56.4
TAR629G0325 Trochodendron aralioides HOM05D008056 ORTHO05D009804 9.4e-10 66.6 76 51.3
vmacro06398 Vaccinium macrocarpon HOM05D008056 ORTHO05D009804 3.6e-09 64.7 81 51.9
Cc02_g01320 Coffea canephora HOM05D008056 ORTHO05D009804 4.6e-09 64.3 79 51.9
MD01G1223300 Malus domestica HOM05D015219 ORTHO05D009804 7.9e-09 63.5 84 50.0
Sabra12G0015100 Salix brachista HOM05D008056 ORTHO05D009804 1.8e-08 62.4 73 58.9
GSVIVG01029691001 Vitis vinifera HOM05D008056 ORTHO05D009804 2.3e-08 62.0 69 58.0
Ciclev10023135m.g Citrus clementina HOM05D008056 ORTHO05D009804 3.0e-08 61.6 78 51.3
Cpa.g.sc3.104 Carica papaya HOM05D008056 ORTHO05D009804 2.0e-07 58.9 74 48.6
Dinv29260 Davidia involucrata HOM05D008056 ORTHO05D009804 4.4e-07 57.8 77 53.2
Nitab4.5_0000548g0010 Nicotiana tabacum HOM05D008056 ORTHO05D009804 4.4e-07 57.8 70 45.7
CANSAT21G1538 Cannabis sativa HOM05D008056 ORTHO05D016163 9.7e-07 56.6 80 42.5
Manes.05G191400 Manihot esculenta HOM05D008056 ORTHO05D009804 9.7e-07 56.6 83 50.6
ECA232G3962 Erigeron canadensis HOM05D008056 ORTHO05D009804 1.3e-06 56.2 76 44.7
ClCG01G000350 Citrullus lanatus HOM05D034518 ORTHO05D034777 4.8e-06 54.3 76 46.1
CAN.G312.7 Capsicum annuum HOM05D008056 ORTHO05D009804 6.3e-06 53.9 67 49.3
Nitab4.5_0005491g0040 Nicotiana tabacum HOM05D008056 ORTHO05D009804 6.3e-06 53.9 80 41.2


User provided reference genes

Program Settings