Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G230301 Glycine max HOM05D000021 ORTHO05D213579 1.2e-64 250.4 200 100.0
Glyma.04G230500 Glycine max HOM05D000021 ORTHO05D000010 1.3e-47 193.7 104 96.2
Glyma.06G134700 Glycine max HOM05D000021 ORTHO05D000010 5.6e-38 161.8 104 81.7
Phvul.009G046900 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 2.4e-33 146.4 103 74.8
Phvul.009G046600 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 5.4e-33 145.2 104 75.0
VMungo1309G1774 Vigna mungo HOM05D000021 ORTHO05D000010 4.3e-30 135.6 103 69.9
Psat5g076440 Pisum sativum HOM05D000021 ORTHO05D000010 2.2e-26 123.2 200 65.5
Psat5g073360 Pisum sativum HOM05D000021 ORTHO05D000010 3.7e-26 122.5 200 57.0
Medtr3g092390 Medicago truncatula HOM05D000021 ORTHO05D000010 2.7e-24 116.3 200 62.5
TPR.G7143 Trifolium pratense HOM05D000021 ORTHO05D000010 2.7e-24 116.3 199 56.8
Ca_16764_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 6.6e-23 111.7 107 56.1
Lj1g0024228 Lotus japonicus HOM05D000021 ORTHO05D000010 2.8e-21 106.3 107 55.1
arahy.Tifrunner.gnm1.ann1.41Z4IQ Arachis hypogaea HOM05D000021 ORTHO05D000010 4.4e-19 99.0 107 53.3
VMungo1309G0549 Vigna mungo HOM05D000021 ORTHO05D000010 7.8e-16 88.2 105 49.5
Medtr3g092420 Medicago truncatula HOM05D000021 ORTHO05D000010 1.3e-15 87.4 199 53.3
TWI56G1145 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 2.8e-13 79.7 105 42.9
arahy.Tifrunner.gnm1.ann1.MMGG0C Arachis hypogaea HOM05D000021 ORTHO05D000010 6.2e-13 78.6 91 51.6
Thecc.04G214000 Theobroma cacao HOM05D000021 ORTHO05D000010 1.8e-12 77.0 106 41.5
Gohir.A05G316500 Gossypium hirsutum HOM05D000021 ORTHO05D000010 4.0e-12 75.9 106 43.4
TWI60G0857 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 6.8e-12 75.1 105 42.9
Gorai.009G340400 Gossypium raimondii HOM05D000021 ORTHO05D000010 1.2e-11 74.3 106 42.5
Thecc.04G214200 Theobroma cacao HOM05D000021 ORTHO05D000010 2.0e-11 73.6 104 42.3
Gohir.D05G317800 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.6e-11 73.2 106 43.4
Medtr3g092360 Medicago truncatula HOM05D000021 ORTHO05D000010 3.8e-10 69.3 197 32.5
QL03p024349 Quercus lobata HOM05D000021 ORTHO05D000010 3.8e-10 69.3 107 41.1
QL03p024318 Quercus lobata HOM05D000021 ORTHO05D000010 2.4e-09 66.6 110 39.1
GSVIVG01010056001 Vitis vinifera HOM05D001469 ORTHO05D001648 3.5e-08 62.8 105 36.2
Duzib268G0098 Durio zibethinus HOM05D000021 ORTHO05D000010 4.6e-08 62.4 104 38.5
CSS0003369 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 3.0e-07 59.7 105 36.2
TAR540G0002 Trochodendron aralioides HOM05D000021 ORTHO05D000010 6.6e-07 58.5 112 37.5
Eucgr.F02724 Eucalyptus grandis HOM05D000021 ORTHO05D000010 1.5e-06 57.4 108 31.5
TAR625G0064 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.5e-06 56.6 112 36.6
Thecc.04G213800 Theobroma cacao HOM05D000021 ORTHO05D000010 4.3e-06 55.8 107 36.4


User provided reference genes

Program Settings