Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 5.3e-90 334.3 171 100.0
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 5.7e-84 314.3 172 94.8
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 1.8e-77 292.7 170 88.2
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 8.9e-77 290.4 173 88.4
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 2.0e-76 289.3 170 87.1
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 3.9e-72 275.0 173 81.5
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.1e-71 273.5 173 80.9
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 7.3e-71 270.8 170 83.5
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 8.9e-69 263.8 171 81.3
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 2.6e-68 262.3 172 82.0
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 4.1e-66 255.0 173 79.2
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.0e-65 252.7 177 74.6
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 3.0e-64 248.8 172 74.4
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 3.9e-64 248.4 176 73.3
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 5.0e-64 248.1 173 75.7
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 4.3e-63 245.0 179 72.6
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 7.3e-63 244.2 176 73.3
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 9.5e-63 243.8 176 75.0
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 1.6e-62 243.0 175 75.4
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 4.7e-62 241.5 174 74.1
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 3.1e-61 238.8 175 73.1
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 5.2e-61 238.0 175 73.7
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 6.8e-61 237.7 173 71.1
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.5e-60 236.5 173 73.4
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 4.4e-60 235.0 177 72.3
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 9.8e-60 233.8 174 70.7
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 1.3e-59 233.4 173 72.3
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.7e-59 231.9 178 73.0
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.7e-59 231.9 178 71.9
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 4.9e-59 231.5 179 66.5
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 6.4e-59 231.1 175 70.3
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 6.4e-59 231.1 175 70.3
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 6.4e-59 231.1 175 70.3
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 8.3e-59 230.7 176 69.3
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 1.9e-58 229.6 178 72.5
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 5.4e-58 228.0 174 69.0
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 5.4e-58 228.0 176 69.9
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 1.2e-57 226.9 180 67.8
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 1.6e-57 226.5 180 70.0
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 3.5e-57 225.3 174 69.0
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 6.0e-57 224.6 183 65.6
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 6.0e-57 224.6 182 65.4
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 6.0e-57 224.6 177 68.4
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.7e-56 223.0 177 66.7
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 5.1e-56 221.5 180 66.7
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 5.1e-56 221.5 175 69.7
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 8.6e-56 220.7 150 73.3
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 3.3e-55 218.8 175 68.0
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 7.3e-55 217.6 177 67.8
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 7.3e-55 217.6 152 77.0
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 9.5e-55 217.2 151 76.8
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 1.6e-54 216.5 182 65.9
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 2.1e-54 216.1 170 66.5
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 2.8e-54 215.7 183 67.8
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 3.6e-54 215.3 176 67.6
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 3.6e-54 215.3 176 67.6
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 3.6e-54 215.3 176 67.6
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 3.6e-54 215.3 173 64.7
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 4.7e-54 214.9 176 67.6
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 6.2e-54 214.5 120 85.0
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 6.2e-54 214.5 170 66.5
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 6.2e-54 214.5 171 69.6
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 6.2e-54 214.5 176 67.6
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 1.1e-53 213.8 176 67.6
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 1.8e-53 213.0 179 65.4
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 3.1e-53 212.2 176 67.6
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 3.1e-53 212.2 176 67.6
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 3.1e-53 212.2 176 67.6
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 4.0e-53 211.8 137 78.8
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 4.0e-53 211.8 137 78.8
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 4.0e-53 211.8 180 65.6
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 6.8e-53 211.1 177 66.7
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 8.9e-53 210.7 175 66.9
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 8.9e-53 210.7 175 66.9
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 8.9e-53 210.7 119 84.9
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 8.9e-53 210.7 174 66.1
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.2e-52 210.3 176 67.0
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.2e-52 210.3 142 77.5
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 2.6e-52 209.1 175 66.9
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 3.4e-52 208.8 178 65.2
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 3.4e-52 208.8 176 65.9
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 7.6e-52 207.6 129 79.8
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 9.9e-52 207.2 198 62.1
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.3e-51 206.8 174 65.5
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 2.9e-51 205.7 128 78.1
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 3.2e-50 202.2 184 60.9
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 7.1e-50 201.1 121 81.0
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 7.1e-50 201.1 179 64.8
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 9.2e-50 200.7 174 64.4
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 3.5e-49 198.7 177 63.8
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 4.6e-49 198.4 138 71.0
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 7.8e-49 197.6 129 75.2
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 5.6e-47 191.4 183 59.6
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 1.2e-46 190.3 164 62.2
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 1.6e-46 189.9 179 59.8
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 5.2e-45 184.9 183 58.5
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 8.9e-45 184.1 120 73.3
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 9.9e-44 180.6 119 69.7
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 2.4e-42 176.0 178 57.9
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 3.5e-41 172.2 173 61.3
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 6.0e-41 171.4 140 65.0
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 2.3e-40 169.5 125 65.6
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.3e-32 143.7 103 68.9
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.3e-32 143.7 103 68.9
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 1.2e-28 130.6 172 48.8
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 4.5e-28 128.6 120 61.7
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 6.4e-27 124.8 155 49.7
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.8e-22 109.4 67 76.1
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 6.2e-22 108.2 58 84.5
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.4e-21 107.1 111 58.6
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 3.1e-21 105.9 114 59.6
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 5.8e-20 101.7 76 73.7
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 3.9e-08 62.4 94 48.9


User provided reference genes

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