Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 3.2e-37 157.9 79 100.0
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 3.8e-30 134.4 82 87.8
Phvul.009G138200 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 2.7e-28 128.3 79 82.3
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 1.6e-20 102.4 81 67.9
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 5.3e-16 87.4 80 60.0
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 5.8e-15 84.0 78 59.0
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 5.8e-15 84.0 81 58.0
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 4.6e-12 74.3 83 53.0
Psat7g050120 Pisum sativum HOM05D010746 ORTHO05D009732 6.0e-12 73.9 80 46.2
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 7.9e-12 73.6 72 52.8
arahy.Tifrunner.gnm1.ann1.U48W6H Arachis hypogaea HOM05D008370 ORTHO05D009732 1.8e-11 72.4 84 56.0
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 5.1e-11 70.9 74 58.1
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 5.1e-11 70.9 74 58.1
arahy.Tifrunner.gnm1.ann1.3XNV5U Arachis hypogaea HOM05D008370 ORTHO05D009732 8.7e-11 70.1 85 55.3
Psat7g050080 Pisum sativum HOM05D008370 ORTHO05D009732 8.7e-11 70.1 83 53.0
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 1.5e-10 69.3 78 53.8
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 1.5e-10 69.3 79 50.6
Phvul.002G267404 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 1.9e-10 68.9 80 50.0
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 5.6e-10 67.4 81 53.1
Glyma.05G186400 Glycine max HOM05D010746 ORTHO05D009732 1.3e-09 66.2 80 41.2
TPR.G2215 Trifolium pratense HOM05D010746 ORTHO05D009732 1.3e-09 66.2 79 43.0
Medtr8g092340 Medicago truncatula HOM05D010746 ORTHO05D009732 1.6e-09 65.9 80 41.2
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 3.7e-09 64.7 79 48.1
Phvul.009G138100 Phaseolus vulgaris HOM05D010746 ORTHO05D009732 3.7e-09 64.7 84 47.6
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 8.1e-09 63.5 84 40.5
Lalb_Chr12g0203401 Lupinus albus HOM05D010746 ORTHO05D009732 8.1e-09 63.5 81 43.2
Actinidia01380 Actinidia chinensis HOM05D008370 ORTHO05D009732 1.4e-08 62.8 85 50.6
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 1.4e-08 62.8 80 47.5
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 1.8e-08 62.4 75 45.3
TAR376G0884 Trochodendron aralioides HOM05D008370 ORTHO05D009732 2.4e-08 62.0 81 42.0
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 4.0e-08 61.2 81 44.4
Sabra05G0071700 Salix brachista HOM05D008370 ORTHO05D009732 4.0e-08 61.2 80 46.2
Medtr3g095180 Medicago truncatula HOM05D010746 ORTHO05D009732 5.3e-08 60.8 86 41.9
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 6.9e-08 60.5 78 47.4
Medtr8g092320 Medicago truncatula HOM05D008370 ORTHO05D009732 6.9e-08 60.5 89 47.2
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 1.5e-07 59.3 76 48.7
Rhsim08G0004800 Rhododendron simsii HOM05D008370 ORTHO05D009732 1.5e-07 59.3 84 48.8
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 1.5e-07 59.3 79 44.3
Lalb_Chr12g0203411 Lupinus albus HOM05D008370 ORTHO05D009732 2.0e-07 58.9 77 46.8
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 2.0e-07 58.9 79 45.6
Manes.13G080360 Manihot esculenta HOM05D008370 ORTHO05D009732 2.0e-07 58.9 80 43.8
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 2.0e-07 58.9 81 45.7
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 2.6e-07 58.5 75 40.0
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 2.6e-07 58.5 86 46.5
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 3.4e-07 58.2 81 45.7
Lj1g0003131 Lotus japonicus HOM05D010746 ORTHO05D009732 3.4e-07 58.2 88 44.3
Lalb_Chr07g0184691 Lupinus albus HOM05D010746 ORTHO05D009732 4.5e-07 57.8 79 40.5
CiPaw.03G131600 Carya illinoinensis HOM05D008370 ORTHO05D009732 5.8e-07 57.4 79 50.6
MD15G1335300 Malus domestica HOM05D015647 ORTHO05D009732 5.8e-07 57.4 91 42.9
Manes.12G145500 Manihot esculenta HOM05D008370 ORTHO05D009732 5.8e-07 57.4 81 44.4
Glyma.06G148200 Glycine max HOM05D010746 ORTHO05D009732 9.9e-07 56.6 85 44.7
Prupe.6G166400 Prunus persica HOM05D008370 ORTHO05D009732 9.9e-07 56.6 77 48.1
arahy.Tifrunner.gnm1.ann1.Z046N5 Arachis hypogaea HOM05D010746 ORTHO05D009732 2.2e-06 55.5 85 38.8
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 3.8e-06 54.7 82 40.2
GSVIVG01022266001 Vitis vinifera HOM05D015647 ORTHO05D009732 3.8e-06 54.7 64 46.9
Gorai.003G048600 Gossypium raimondii HOM05D008370 ORTHO05D009732 4.9e-06 54.3 83 43.4
Glyma.04G217600 Glycine max HOM05D010746 ORTHO05D009732 6.4e-06 53.9 85 43.5
Gorai.002G039200 Gossypium raimondii HOM05D008370 ORTHO05D009732 6.4e-06 53.9 82 40.2
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 8.4e-06 53.5 82 42.7


User provided reference genes

Program Settings