Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G217600 Glycine max HOM05D010746 ORTHO05D009732 6.3e-45 183.7 93 100.0
Glyma.06G148200 Glycine max HOM05D010746 ORTHO05D009732 8.3e-37 156.8 85 92.9
Phvul.009G138100 Phaseolus vulgaris HOM05D010746 ORTHO05D009732 2.8e-32 141.7 85 85.9
TPR.G2215 Trifolium pratense HOM05D010746 ORTHO05D009732 7.8e-19 97.1 82 64.6
Medtr3g095180 Medicago truncatula HOM05D010746 ORTHO05D009732 3.9e-18 94.7 86 60.5
Psat7g050120 Pisum sativum HOM05D010746 ORTHO05D009732 1.1e-17 93.2 85 60.0
Lj1g0003131 Lotus japonicus HOM05D010746 ORTHO05D009732 5.6e-17 90.9 88 61.4
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 2.8e-16 88.6 85 55.3
Psat5g065200 Pisum sativum HOM05D010746 ORTHO05D009732 1.1e-15 86.7 86 55.8
arahy.Tifrunner.gnm1.ann1.Z046N5 Arachis hypogaea HOM05D010746 ORTHO05D009732 2.2e-13 79.0 89 52.8
TPR.G227 Trifolium pratense HOM05D010746 ORTHO05D009732 2.2e-13 79.0 87 51.7
Glyma.05G186400 Glycine max HOM05D010746 ORTHO05D009732 3.8e-13 78.2 82 58.5
Lalb_Chr12g0203401 Lupinus albus HOM05D010746 ORTHO05D009732 8.4e-13 77.0 86 54.7
Medtr8g092340 Medicago truncatula HOM05D010746 ORTHO05D009732 8.4e-13 77.0 85 56.5
arahy.Tifrunner.gnm1.ann1.Q4N452 Arachis hypogaea HOM05D010746 ORTHO05D009732 1.0e-10 70.1 88 50.0
arahy.Tifrunner.gnm1.ann1.R1SWRL Arachis hypogaea HOM05D010746 ORTHO05D009732 1.7e-10 69.3 88 50.0
arahy.Tifrunner.gnm1.ann1.4A1U07 Arachis hypogaea HOM05D010746 ORTHO05D009732 3.9e-10 68.2 93 47.3
TPR.G8284 Trifolium pratense HOM05D010746 ORTHO05D009732 3.3e-09 65.1 85 44.7
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 1.3e-08 63.2 85 43.5
arahy.Tifrunner.gnm1.ann1.3XNV5U Arachis hypogaea HOM05D008370 ORTHO05D009732 6.2e-08 60.8 84 42.9
Lalb_Chr07g0184691 Lupinus albus HOM05D010746 ORTHO05D009732 6.2e-08 60.8 79 49.4
Sed0018859 Sechium edule HOM05D029062 ORTHO05D009732 1.4e-07 59.7 85 42.4
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 3.1e-07 58.5 86 43.0
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 3.1e-07 58.5 86 43.0
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 4.0e-07 58.2 85 40.0
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 6.9e-07 57.4 83 43.4
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 9.0e-07 57.0 80 43.8
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 2.0e-06 55.8 85 43.5
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 2.6e-06 55.5 82 40.2
ClCG02G000910 Citrullus lanatus HOM05D029062 ORTHO05D034721 2.6e-06 55.5 88 43.2
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 3.4e-06 55.1 90 41.1
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 9.9e-06 53.5 90 38.9


User provided reference genes

Program Settings