Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 0.0e+00 1094.0 537 100.0
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 2.5e-271 938.3 537 85.1
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 8.2e-262 906.7 537 81.9
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 7.7e-260 900.2 540 79.3
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 7.0e-253 877.1 542 79.2
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.9e-250 869.0 542 78.4
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.8e-248 862.4 537 76.4
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 7.7e-244 847.0 537 74.9
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 8.3e-238 827.0 537 74.5
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 4.1e-237 824.7 541 76.2
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 6.2e-209 731.1 541 65.6
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 2.3e-208 729.2 467 74.5
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 4.0e-208 728.4 567 62.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 3.2e-205 718.8 540 63.9
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.6e-204 716.5 541 64.3
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 7.6e-199 697.6 543 62.4
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 4.9e-198 694.9 543 61.0
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 7.8e-196 687.6 542 61.8
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.0e-195 685.6 541 61.9
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.5e-194 683.3 542 61.6
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.6e-193 679.9 543 59.3
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.6e-193 679.9 541 61.6
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.4e-192 676.0 541 61.4
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 4.0e-192 675.2 540 61.3
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 4.0e-192 675.2 541 60.3
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 6.8e-192 674.5 541 61.0
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 8.9e-192 674.1 543 60.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.2e-191 673.7 541 61.0
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 2.6e-191 672.5 541 60.1
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 5.8e-191 671.4 539 59.7
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.2e-190 669.5 540 59.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 7.1e-189 664.5 540 58.9
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.7e-188 662.5 540 58.3
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 6.0e-188 661.4 543 59.1
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.3e-187 660.2 541 60.6
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.0e-187 659.1 542 59.0
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 8.1e-185 651.0 542 58.7
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.0e-183 646.4 542 59.4
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 3.2e-181 639.0 543 56.9
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 4.2e-181 638.6 542 58.7
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 4.6e-180 635.2 543 56.9
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 2.3e-179 632.9 545 56.5
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.3e-179 632.9 543 57.3
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.9e-179 632.1 544 59.0
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 2.5e-178 629.4 546 57.5
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 4.3e-178 628.6 545 56.3
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.3e-177 627.1 543 57.6
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 6.2e-177 624.8 544 55.3
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 8.1e-177 624.4 542 56.1
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 8.1e-177 624.4 540 55.7
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 1.1e-176 624.0 542 56.3
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.4e-176 623.6 542 55.5
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.8e-176 623.2 544 57.7
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 2.4e-176 622.9 542 55.5
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 9.9e-175 617.5 542 55.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 9.9e-175 617.5 542 57.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 1.3e-174 617.1 542 58.1
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 3.8e-174 615.5 542 57.4
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.1e-173 614.0 542 56.6
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.9e-173 613.2 564 55.0
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.4e-173 612.8 542 55.4
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 3.2e-173 612.5 541 56.7
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.8e-171 606.7 544 58.1
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 4.3e-170 602.1 572 51.0
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.3e-170 602.1 633 49.0
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 7.4e-170 601.3 543 55.1
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 7.4e-170 601.3 542 54.8
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 9.6e-170 600.9 541 53.2
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.1e-168 597.4 543 56.0
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.8e-168 596.7 540 53.1
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.2e-167 594.0 539 54.7
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 9.3e-165 584.3 541 54.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 3.5e-164 582.4 603 51.1
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 6.0e-164 581.6 492 58.1
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.0e-163 580.9 473 60.7
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.0e-163 580.9 540 52.4
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.3e-163 580.5 542 53.3
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-163 580.5 549 53.6
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 3.0e-163 579.3 538 53.2
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 3.9e-163 578.9 549 53.4
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 5.1e-163 578.6 541 52.5
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 3.3e-162 575.9 533 52.2
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 3.3e-162 575.9 523 55.6
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.6e-161 573.5 540 53.1
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 2.9e-158 562.8 490 57.6
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 2.5e-157 559.7 428 64.0
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 2.8e-153 546.2 542 51.3
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 2.5e-149 533.1 593 47.7
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 3.2e-149 532.7 559 49.7
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 6.1e-148 528.5 462 54.3
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 4.1e-144 515.8 543 48.3
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 7.4e-138 495.0 557 49.0
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.4e-136 490.0 553 48.1
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 5.3e-136 488.8 446 55.2
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.7e-132 476.5 471 52.0
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 3.0e-131 473.0 538 49.4
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 3.1e-128 463.0 554 45.8
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 1.0e-118 431.4 489 45.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.0e-114 417.2 312 66.0
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.3e-110 404.4 206 93.7
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.1e-104 384.8 400 49.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.0e-95 354.0 532 36.7
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.6e-87 327.8 562 35.8
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 4.0e-83 313.2 569 35.0
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.4e-82 310.1 561 34.9
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.4e-80 304.7 573 34.0
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 3.3e-77 293.5 223 64.6
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 2.2e-73 280.8 468 36.1
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 3.0e-46 190.7 249 39.0
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 5.7e-45 186.4 109 78.9
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.3e-44 185.3 171 53.8
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.1e-38 163.3 128 65.6
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 4.8e-36 156.8 197 44.7
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 3.1e-27 127.5 76 78.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.9e-25 120.9 120 46.7
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 7.7e-18 96.3 60 68.3
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 1.3e-12 79.0 100 45.0
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.9e-08 65.1 56 57.1
VMungo1383G3444 Vigna mungo HOM05D006431 ORTHO05D007918 4.7e-07 60.5 205 23.9
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.8e-06 58.5 52 55.8
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 4.0e-06 57.4 128 26.6


User provided reference genes

Program Settings