Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G187432 Glycine max HOM05D000127 ORTHO05D212414 1.8e-81 305.8 149 100.0
Glyma.06G178500 Glycine max HOM05D000127 ORTHO05D010660 2.4e-22 109.4 159 45.3
VMungo1309G0893 Vigna mungo HOM05D000127 ORTHO05D010660 4.3e-19 98.6 158 38.6
Medtr0002s1180 Medicago truncatula HOM05D000127 ORTHO05D010660 1.8e-12 76.6 70 54.3
Ca_24839_v3 Cicer arietinum L. HOM05D000127 ORTHO05D010660 2.3e-12 76.3 59 59.3
Glyma.03G233700 Glycine max HOM05D000127 ORTHO05D010660 2.3e-12 76.3 83 47.0
Medtr5g067690 Medicago truncatula HOM05D000127 ORTHO05D010660 2.3e-12 76.3 71 50.7
arahy.Tifrunner.gnm1.ann1.D0QIUU Arachis hypogaea HOM05D000127 ORTHO05D010660 3.9e-12 75.5 60 56.7
Lj2g0016366 Lotus japonicus HOM05D000127 ORTHO05D010660 3.9e-12 75.5 59 57.6
Phvul.001G227300 Phaseolus vulgaris HOM05D000127 ORTHO05D010660 5.1e-12 75.1 59 57.6
Psat2g160440 Pisum sativum HOM05D000127 ORTHO05D010660 5.1e-12 75.1 59 61.0
Glyma.08G057800 Glycine max HOM05D000127 ORTHO05D010660 6.7e-12 74.7 59 59.3
Lj3g0021638 Lotus japonicus HOM05D000127 ORTHO05D010660 1.1e-11 73.9 69 53.6
arahy.Tifrunner.gnm1.ann1.LA639H Arachis hypogaea HOM05D000127 ORTHO05D010660 1.5e-11 73.6 60 55.0
Lj3g0004274 Lotus japonicus HOM05D000127 ORTHO05D010660 1.5e-11 73.6 53 60.4
TPR.G15346 Trifolium pratense HOM05D000127 ORTHO05D010660 1.5e-11 73.6 70 55.7
TPR.G28678 Trifolium pratense HOM05D000127 ORTHO05D010660 1.5e-11 73.6 59 59.3
TPR.G15347 Trifolium pratense HOM05D000127 ORTHO05D010660 1.9e-11 73.2 76 47.4
TPR.G28677 Trifolium pratense HOM05D000127 ORTHO05D010660 1.9e-11 73.2 71 50.7
VMungo1383G0725 Vigna mungo HOM05D000127 ORTHO05D010660 1.9e-11 73.2 68 51.5
Glyma.19G230900 Glycine max HOM05D000127 ORTHO05D010660 2.5e-11 72.8 53 56.6
arahy.Tifrunner.gnm1.ann1.EQIT31 Arachis hypogaea HOM05D000127 ORTHO05D010660 3.3e-11 72.4 60 55.0
arahy.Tifrunner.gnm1.ann1.XSER3A Arachis hypogaea HOM05D000127 ORTHO05D010660 3.3e-11 72.4 60 55.0
Lj5g0011700 Lotus japonicus HOM05D000127 ORTHO05D010660 3.3e-11 72.4 53 58.5
TPR.G28686 Trifolium pratense HOM05D000127 ORTHO05D010660 3.3e-11 72.4 59 57.6
Lalb_Chr08g0231711 Lupinus albus HOM05D000127 ORTHO05D010660 4.3e-11 72.0 59 59.3
VMungo1127G1463 Vigna mungo HOM05D000127 ORTHO05D010660 4.3e-11 72.0 68 52.9
TPR.G29486 Trifolium pratense HOM05D000127 ORTHO05D010660 5.6e-11 71.6 63 50.8
Psat1g131840 Pisum sativum HOM05D000127 ORTHO05D010660 7.4e-11 71.2 59 50.8
Medtr3g037270 Medicago truncatula HOM05D000127 ORTHO05D010660 1.3e-10 70.5 59 55.9
Medtr2g040100 Medicago truncatula HOM05D000127 ORTHO05D010660 1.6e-10 70.1 100 40.0
TPR.G28688 Trifolium pratense HOM05D000127 ORTHO05D010660 1.6e-10 70.1 59 54.2
Ca_15121_v3 Cicer arietinum L. HOM05D000127 ORTHO05D010660 2.1e-10 69.7 61 52.5
Psat2g160480 Pisum sativum HOM05D000127 ORTHO05D010660 2.1e-10 69.7 112 37.5
VMungo1383G0608 Vigna mungo HOM05D000127 ORTHO05D010660 2.1e-10 69.7 59 54.2
Lalb_Chr03g0032491 Lupinus albus HOM05D000127 ORTHO05D010660 2.8e-10 69.3 59 54.2
Psat5g126800 Pisum sativum HOM05D000127 ORTHO05D010660 3.7e-10 68.9 61 52.5
Lalb_Chr10g0102851 Lupinus albus HOM05D000127 ORTHO05D010660 4.8e-10 68.6 59 52.5
Ca_13130_v3 Cicer arietinum L. HOM05D000127 ORTHO05D010660 6.2e-10 68.2 101 36.6
Lj6g0019587 Lotus japonicus HOM05D000127 ORTHO05D010660 8.1e-10 67.8 61 52.5
Glyma.11G229400 Glycine max HOM05D000127 ORTHO05D010660 1.1e-09 67.4 61 50.8
Lj1g0005132 Lotus japonicus HOM05D000127 ORTHO05D010660 1.4e-09 67.0 59 54.2
VMungo1383G2222 Vigna mungo HOM05D000127 ORTHO05D010660 1.4e-09 67.0 61 49.2
Lj6g0001119 Lotus japonicus HOM05D000127 ORTHO05D010660 2.4e-09 66.2 61 52.5
Lalb_Chr18g0060001 Lupinus albus HOM05D000127 ORTHO05D000243 4.0e-09 65.5 61 49.2
Medtr3g037260 Medicago truncatula HOM05D000127 ORTHO05D010660 4.0e-09 65.5 59 52.5
Ca_00227_v3 Cicer arietinum L. HOM05D000127 ORTHO05D000243 5.3e-09 65.1 61 45.9
Phvul.001G242600 Phaseolus vulgaris HOM05D000127 ORTHO05D010660 5.3e-09 65.1 61 47.5
Cc09_g08860 Coffea canephora HOM05D000127 ORTHO05D000243 9.0e-09 64.3 62 45.2
Glyma.15G066300 Glycine max HOM05D000127 ORTHO05D000243 1.2e-08 63.9 61 47.5
Medtr1g043400 Medicago truncatula HOM05D000127 ORTHO05D014168 2.0e-08 63.2 53 52.8
Medtr1g045870 Medicago truncatula HOM05D000127 ORTHO05D014168 2.0e-08 63.2 53 52.8
Ca_11879_v3 Cicer arietinum L. HOM05D000127 ORTHO05D014168 2.6e-08 62.8 59 49.2
Psat0s3135g0160 Pisum sativum HOM05D000127 ORTHO05D014168 2.6e-08 62.8 59 47.5
Glyma.10G131500 Glycine max HOM05D000127 ORTHO05D014168 3.4e-08 62.4 53 54.7
TPR.G16224 Trifolium pratense HOM05D000127 ORTHO05D010660 4.5e-08 62.0 61 47.5
TPR.G36806 Trifolium pratense HOM05D000127 ORTHO05D000243 7.6e-08 61.2 61 45.9
Medtr2g011520 Medicago truncatula HOM05D000127 ORTHO05D000243 9.9e-08 60.8 61 41.0
Psat0s2812g0080 Pisum sativum HOM05D000127 ORTHO05D014168 1.3e-07 60.5 59 47.5
TAR629G1873 Trochodendron aralioides HOM05D000127 ORTHO05D000243 2.2e-07 59.7 61 42.6
arahy.Tifrunner.gnm1.ann1.N4EVUV Arachis hypogaea HOM05D000127 ORTHO05D010660 2.9e-07 59.3 63 41.3
arahy.Tifrunner.gnm1.ann1.YD0JFD Arachis hypogaea HOM05D000127 ORTHO05D010660 2.9e-07 59.3 63 41.3
Dinv32275 Davidia involucrata HOM05D000127 ORTHO05D000243 2.9e-07 59.3 62 41.9
Psat1g209440 Pisum sativum HOM05D000127 ORTHO05D000243 3.8e-07 58.9 61 39.3
Psat2g186040 Pisum sativum HOM05D000127 ORTHO05D000243 3.8e-07 58.9 61 39.3
GSVIVG01026473001 Vitis vinifera HOM05D000127 ORTHO05D000243 3.8e-07 58.9 61 39.3
TPR.G23995 Trifolium pratense HOM05D000127 ORTHO05D014168 4.9e-07 58.5 59 45.8
VMungo0720G2672 Vigna mungo HOM05D000127 ORTHO05D014168 4.9e-07 58.5 59 49.2
Rhsim08G0001500 Rhododendron simsii HOM05D000127 ORTHO05D000243 8.4e-07 57.8 61 36.1
PGSC0003DMG400013814 Solanum tuberosum HOM05D000127 ORTHO05D000243 8.4e-07 57.8 61 41.0
TAR625G1280 Trochodendron aralioides HOM05D000127 ORTHO05D000243 8.4e-07 57.8 61 42.6
CAN.G1037.5 Capsicum annuum HOM05D000127 ORTHO05D000243 1.1e-06 57.4 61 39.3
Lj6g0001074 Lotus japonicus HOM05D000127 ORTHO05D000243 1.1e-06 57.4 61 41.0
Atru.chr4.880 Acer truncatum HOM05D000127 ORTHO05D000243 1.4e-06 57.0 61 44.3
arahy.Tifrunner.gnm1.ann1.Y77N6F Arachis hypogaea HOM05D000127 ORTHO05D000243 1.4e-06 57.0 61 39.3
CANSAT01G1946 Cannabis sativa HOM05D000127 ORTHO05D000243 1.4e-06 57.0 61 39.3
CiPaw.04G084700 Carya illinoinensis HOM05D000127 ORTHO05D000243 1.4e-06 57.0 61 42.6
Manes.12G156500 Manihot esculenta HOM05D000127 ORTHO05D000243 1.4e-06 57.0 61 42.6
Psat6g106880 Pisum sativum HOM05D000127 ORTHO05D014168 1.4e-06 57.0 59 49.2
Sed0008614 Sechium edule HOM05D000127 ORTHO05D000243 1.4e-06 57.0 61 39.3
arahy.Tifrunner.gnm1.ann1.78KBF3 Arachis hypogaea HOM05D000127 ORTHO05D010660 1.9e-06 56.6 62 40.3
Nn2g14916 Nelumbo nucifera HOM05D000127 ORTHO05D000243 1.9e-06 56.6 61 39.3
Thecc.01G133900 Theobroma cacao HOM05D000127 ORTHO05D000243 1.9e-06 56.6 61 41.0
TAR626G1562 Trochodendron aralioides HOM05D000127 ORTHO05D000243 1.9e-06 56.6 61 44.3
GSVIVG01021420001 Vitis vinifera HOM05D000127 ORTHO05D000243 1.9e-06 56.6 55 40.0
arahy.Tifrunner.gnm1.ann1.HBZ119 Arachis hypogaea HOM05D000127 ORTHO05D000243 2.4e-06 56.2 61 39.3
MBI15_g18586_MAGBIO Magnolia biondii HOM05D000127 ORTHO05D000243 2.4e-06 56.2 59 44.1
Nn7g36580 Nelumbo nucifera HOM05D000127 ORTHO05D000243 2.4e-06 56.2 61 37.7
Sopen06g020760 Solanum pennellii HOM05D000127 ORTHO05D000243 2.4e-06 56.2 61 39.3
vmacro18677 Vaccinium macrocarpon HOM05D000127 ORTHO05D000243 2.4e-06 56.2 55 41.8
Haze_05564 Corylus avellana HOM05D000127 ORTHO05D000243 3.2e-06 55.8 59 47.5
Phvul.007G232300 Phaseolus vulgaris HOM05D000127 ORTHO05D014168 3.2e-06 55.8 53 49.1
Haze_25181 Corylus avellana HOM05D000127 ORTHO05D000243 4.2e-06 55.5 62 37.1
Gohir.A05G383700 Gossypium hirsutum HOM05D000127 ORTHO05D000243 4.2e-06 55.5 61 44.3
Gohir.D04G031600 Gossypium hirsutum HOM05D000127 ORTHO05D000243 4.2e-06 55.5 61 44.3
Gorai.012G035800 Gossypium raimondii HOM05D000127 ORTHO05D000243 4.2e-06 55.5 61 44.3
Solyc06g060630.1 Solanum lycopersicum HOM05D000127 ORTHO05D000243 4.2e-06 55.5 61 37.7
Actinidia05722 Actinidia chinensis HOM05D000127 ORTHO05D000440 5.5e-06 55.1 60 38.3
Hma1.2p1_1414F.1_g281920 Hydrangea macrophylla HOM05D000127 ORTHO05D000243 5.5e-06 55.1 61 41.0
MD01G1005100 Malus domestica HOM05D000127 ORTHO05D000243 5.5e-06 55.1 61 39.3
Manes.13G085700 Manihot esculenta HOM05D000127 ORTHO05D000243 5.5e-06 55.1 61 42.6
Phvul.007G232400 Phaseolus vulgaris HOM05D000127 ORTHO05D014168 5.5e-06 55.1 53 49.1
Prupe.4G271900 Prunus persica HOM05D000127 ORTHO05D000243 5.5e-06 55.1 61 39.3
SGA_v2.0_scaffold292G47373 Striga asiatica HOM05D000127 ORTHO05D000243 5.5e-06 55.1 61 39.3
THA.LOC104804482 Tarenaya hassleriana HOM05D000127 ORTHO05D000243 5.5e-06 55.1 61 37.7
Os05g0473401 Oryza sativa ssp. japonica HOM05D000127 ORTHO05D000243 7.1e-06 54.7 61 34.4
Phvul.006G193500 Phaseolus vulgaris HOM05D000127 ORTHO05D000243 7.1e-06 54.7 61 37.7
QL06p030673 Quercus lobata HOM05D000127 ORTHO05D000243 7.1e-06 54.7 61 37.7
SalBow6G1556 Salvia bowleyana HOM05D000127 ORTHO05D000243 7.1e-06 54.7 61 41.0
Actinidia32604 Actinidia chinensis HOM05D000127 ORTHO05D000243 9.3e-06 54.3 75 34.7
arahy.Tifrunner.gnm1.ann1.98CCZ7 Arachis hypogaea HOM05D000127 ORTHO05D000243 9.3e-06 54.3 61 39.3
CSS0035677 Camellia sinensis var. sinensis HOM05D000127 ORTHO05D000243 9.3e-06 54.3 59 42.4
Duzib264G1288 Durio zibethinus HOM05D000127 ORTHO05D000243 9.3e-06 54.3 61 41.0
Medtr3g031170 Medicago truncatula HOM05D000127 ORTHO05D000243 9.3e-06 54.3 61 41.0
Nn7g36579 Nelumbo nucifera HOM05D000127 ORTHO05D000243 9.3e-06 54.3 61 36.1
Oeu017011.1 Olea europaea HOM05D000127 ORTHO05D000243 9.3e-06 54.3 61 39.3
Peaxi162Scf00319g00010 Petunia axillaris HOM05D000127 ORTHO05D000243 9.3e-06 54.3 61 39.3
Psat0s3750g0120 Pisum sativum HOM05D000127 ORTHO05D014168 9.3e-06 54.3 136 27.2


User provided reference genes

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