Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G149700 Glycine max HOM05D000905 ORTHO05D000749 2.1e-63 245.7 144 100.0
Glyma.05G032600 Glycine max HOM05D000905 ORTHO05D000749 3.6e-31 138.7 100 82.0
Glyma.17G094100 Glycine max HOM05D000905 ORTHO05D000749 9.2e-27 124.0 100 75.0
VMungo1215G1294 Vigna mungo HOM05D000905 ORTHO05D000749 2.1e-23 112.8 101 70.3
Phvul.003G196100 Phaseolus vulgaris HOM05D000905 ORTHO05D000749 3.8e-20 102.1 101 64.4
Ca_21875_v3 Cicer arietinum L. HOM05D000905 ORTHO05D000749 1.4e-19 100.1 94 64.9
Psat4g055280 Pisum sativum HOM05D000905 ORTHO05D000749 2.4e-19 99.4 94 63.8
arahy.Tifrunner.gnm1.ann1.Y3FQDK Arachis hypogaea HOM05D000905 ORTHO05D000749 9.3e-19 97.4 94 63.8
Glyma.06G187500 Glycine max HOM05D000905 ORTHO05D000749 6.0e-18 94.7 94 63.8
Medtr4g107110 Medicago truncatula HOM05D000905 ORTHO05D000749 1.0e-17 94.0 94 63.8
Lalb_Chr12g0201301 Lupinus albus HOM05D000905 ORTHO05D000749 1.3e-17 93.6 102 58.8
Lalb_Chr13g0298011 Lupinus albus HOM05D000905 ORTHO05D000749 2.3e-17 92.8 100 61.0
TPR.G38409 Trifolium pratense HOM05D000905 ORTHO05D000749 6.6e-17 91.3 90 63.3
Dinv13123 Davidia involucrata HOM05D000905 ORTHO05D000749 1.5e-16 90.1 94 57.4
Glyma.04G177600 Glycine max HOM05D000905 ORTHO05D000749 1.9e-16 89.7 94 62.8
VMungo1309G1811 Vigna mungo HOM05D000905 ORTHO05D000749 5.6e-16 88.2 94 60.6
Dinv02654 Davidia involucrata HOM05D000905 ORTHO05D000749 4.8e-15 85.1 96 55.2
Phvul.009G183200 Phaseolus vulgaris HOM05D000905 ORTHO05D000749 4.8e-15 85.1 94 59.6
FvH4_5g16200 Fragaria vesca HOM05D000905 ORTHO05D000749 8.1e-15 84.3 101 51.5
FAN08G2607 Fragaria x ananassa HOM05D000905 ORTHO05D000749 8.1e-15 84.3 111 45.9
FAN18G4018 Fragaria x ananassa HOM05D000905 ORTHO05D000749 8.1e-15 84.3 101 51.5
Prupe.5G181300 Prunus persica HOM05D000905 ORTHO05D000749 8.1e-15 84.3 101 52.5
FAN13G0029 Fragaria x ananassa HOM05D000905 ORTHO05D000749 1.1e-14 84.0 111 45.9
arahy.Tifrunner.gnm1.ann1.6S4AXF Arachis hypogaea HOM05D000905 ORTHO05D000749 2.4e-14 82.8 94 57.4
FAN04G1724 Fragaria x ananassa HOM05D000905 ORTHO05D000749 2.4e-14 82.8 111 45.0
Sed0017175 Sechium edule HOM05D000905 ORTHO05D000749 3.1e-14 82.4 100 53.0
RcHm_v2.0_Chr7g0179911 Rosa chinensis HOM05D000905 ORTHO05D000749 4.0e-14 82.0 94 51.1
CsaV3_1G001890 Cucumis sativus L. HOM05D000905 ORTHO05D000749 6.9e-14 81.3 100 53.0
MELO3C017132.2 Cucumis melo HOM05D000905 ORTHO05D000749 1.2e-13 80.5 100 53.0
ClCG06G016620 Citrullus lanatus HOM05D000905 ORTHO05D000749 2.0e-13 79.7 125 44.8
CANSAT80G0025 Cannabis sativa HOM05D000905 ORTHO05D000749 9.9e-13 77.4 100 53.0
GSVIVG01007847001 Vitis vinifera HOM05D000905 ORTHO05D000749 1.7e-12 76.6 101 49.5
arahy.Tifrunner.gnm1.ann1.DJ21JL Arachis hypogaea HOM05D000905 ORTHO05D000749 2.2e-12 76.3 96 53.1
Lj4g0005128 Lotus japonicus HOM05D000905 ORTHO05D000749 2.2e-12 76.3 95 58.9
CSS0015033 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 3.8e-12 75.5 94 48.9
CiPaw.11G033800 Carya illinoinensis HOM05D000905 ORTHO05D000749 6.4e-12 74.7 93 54.8
vmacro19346 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 8.4e-12 74.3 98 48.0
Haze_07420 Corylus avellana HOM05D000905 ORTHO05D000749 1.1e-11 73.9 100 53.0
Rhsim08G0164300 Rhododendron simsii HOM05D000905 ORTHO05D000749 1.1e-11 73.9 97 48.5
Potri.015G069200 Populus trichocarpa HOM05D000905 ORTHO05D000749 3.2e-11 72.4 94 48.9
Actinidia37688 Actinidia chinensis HOM05D000905 ORTHO05D000749 4.2e-11 72.0 94 46.8
Cfa009082 Carpinus fangiana HOM05D000905 ORTHO05D000749 4.2e-11 72.0 94 50.0
Nn3g17052 Nelumbo nucifera HOM05D000905 ORTHO05D000749 4.2e-11 72.0 109 45.9
MD14G1188900 Malus domestica HOM05D000905 ORTHO05D000749 5.4e-11 71.6 96 46.9
TAR622G1363 Trochodendron aralioides HOM05D000905 ORTHO05D000749 5.4e-11 71.6 99 46.5
Nn4g22959 Nelumbo nucifera HOM05D000905 ORTHO05D000749 9.3e-11 70.9 102 47.1
Prupe.1G262400 Prunus persica HOM05D000905 ORTHO05D000749 9.3e-11 70.9 100 47.0
Atru.chr9.2382 Acer truncatum HOM05D000905 ORTHO05D000749 1.2e-10 70.5 93 46.2
arahy.Tifrunner.gnm1.ann1.N0FVBM Arachis hypogaea HOM05D000905 ORTHO05D000749 1.2e-10 70.5 96 51.0
Manes.06G099400 Manihot esculenta HOM05D000905 ORTHO05D000749 1.2e-10 70.5 93 50.5
QL03p067468 Quercus lobata HOM05D000905 ORTHO05D000749 1.6e-10 70.1 101 45.5
Sabra15G0093600 Salix brachista HOM05D000905 ORTHO05D000749 2.1e-10 69.7 101 47.5
Thecc.03G001800 Theobroma cacao HOM05D000905 ORTHO05D000749 2.1e-10 69.7 94 48.9
Atru.chr11.1924 Acer truncatum HOM05D000905 ORTHO05D000749 3.5e-10 68.9 101 45.5
CiPaw.05G144200 Carya illinoinensis HOM05D000905 ORTHO05D000749 4.6e-10 68.6 102 43.1
MD13G1084500 Malus domestica HOM05D000905 ORTHO05D000749 4.6e-10 68.6 101 43.6
TAR629G0333 Trochodendron aralioides HOM05D000905 ORTHO05D000749 4.6e-10 68.6 100 49.0
Actinidia14985 Actinidia chinensis HOM05D000905 ORTHO05D000749 6.0e-10 68.2 101 46.5
Haze_12114 Corylus avellana HOM05D000905 ORTHO05D000749 6.0e-10 68.2 94 48.9
Actinidia34967 Actinidia chinensis HOM05D000905 ORTHO05D000749 7.9e-10 67.8 94 47.9
MD06G1183000 Malus domestica HOM05D000905 ORTHO05D000749 7.9e-10 67.8 89 46.1
Manes.14G071700 Manihot esculenta HOM05D000905 ORTHO05D000749 7.9e-10 67.8 100 48.0
Aqoxy3G00862 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 1.0e-09 67.4 99 49.5
Aqoxy3G03163 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 1.0e-09 67.4 100 48.0
Lj9C455T6 Lonicera japonica HOM05D000905 ORTHO05D000749 1.0e-09 67.4 94 47.9
Potri.010G038900 Populus trichocarpa HOM05D000905 ORTHO05D000749 1.3e-09 67.0 102 48.0
Potri.012G074400 Populus trichocarpa HOM05D000905 ORTHO05D000749 1.8e-09 66.6 94 46.8
Potri.008G192100 Populus trichocarpa HOM05D000905 ORTHO05D000749 2.3e-09 66.2 103 48.5
TAR374G1378 Trochodendron aralioides HOM05D000905 ORTHO05D000749 2.3e-09 66.2 94 47.9
Ciclev10030884m.g Citrus clementina HOM05D000905 ORTHO05D000749 3.0e-09 65.9 101 45.5
Actinidia19070 Actinidia chinensis HOM05D000905 ORTHO05D000749 5.1e-09 65.1 102 47.1
Gohir.A03G076200 Gossypium hirsutum HOM05D000905 ORTHO05D000749 5.1e-09 65.1 94 47.9
PGR044G2393 Punica granatum HOM05D000905 ORTHO05D000749 5.1e-09 65.1 101 45.5
Sabra10G0027500 Salix brachista HOM05D000905 ORTHO05D000749 5.1e-09 65.1 100 48.0
Dinv24927 Davidia involucrata HOM05D000905 ORTHO05D000749 6.7e-09 64.7 101 44.6
Duzib084G1339 Durio zibethinus HOM05D000905 ORTHO05D000749 8.7e-09 64.3 94 47.9
Gohir.D03G089500 Gossypium hirsutum HOM05D000905 ORTHO05D000749 8.7e-09 64.3 94 47.9
Gorai.003G071900 Gossypium raimondii HOM05D000905 ORTHO05D000749 8.7e-09 64.3 94 47.9
PGR102G2108 Punica granatum HOM05D000905 ORTHO05D000749 8.7e-09 64.3 96 42.7
Rhsim12G0160800 Rhododendron simsii HOM05D000905 ORTHO05D000749 1.1e-08 63.9 101 44.6
Eucgr.K02894 Eucalyptus grandis HOM05D000905 ORTHO05D000749 1.5e-08 63.5 100 45.0
TAR371G0402 Trochodendron aralioides HOM05D000905 ORTHO05D000749 1.5e-08 63.5 101 47.5
GSVIVG01020135001 Vitis vinifera HOM05D000905 ORTHO05D000749 1.5e-08 63.5 95 41.1
Actinidia04951 Actinidia chinensis HOM05D000905 ORTHO05D000749 1.9e-08 63.2 92 43.5
MBI15_g14834_MAGBIO Magnolia biondii HOM05D000905 ORTHO05D000749 1.9e-08 63.2 101 46.5
QL10p013932 Quercus lobata HOM05D000905 ORTHO05D000749 1.9e-08 63.2 101 49.5
Cpa.g.sc5.317 Carica papaya HOM05D000905 ORTHO05D000749 2.5e-08 62.8 101 45.5
vmacro16580 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 2.5e-08 62.8 102 43.1
Sabra08G0145600 Salix brachista HOM05D000905 ORTHO05D000749 4.3e-08 62.0 115 43.5
Ciclev10019374m.g Citrus clementina HOM05D000905 ORTHO05D000749 5.6e-08 61.6 92 45.7
CSS0043302 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 7.4e-08 61.2 101 44.6
MELO3C026509.2 Cucumis melo HOM05D000905 ORTHO05D000749 7.4e-08 61.2 123 42.3
Manes.05G093500 Manihot esculenta HOM05D000905 ORTHO05D000749 7.4e-08 61.2 102 42.2
COL.COLO4_04223 Corchorus olitorius HOM05D000905 ORTHO05D000749 1.3e-07 60.5 97 43.3
Hma1.2p1_0289F.1_g114530 Hydrangea macrophylla HOM05D000905 ORTHO05D000749 1.3e-07 60.5 132 37.9
CsaV3_6G036020 Cucumis sativus L. HOM05D000905 ORTHO05D000749 1.6e-07 60.1 123 41.5
Nitab4.5_0000642g0230 Nicotiana tabacum HOM05D000905 ORTHO05D000749 1.6e-07 60.1 114 42.1
Nitab4.5_0002875g0060 Nicotiana tabacum HOM05D000905 ORTHO05D000749 2.8e-07 59.3 93 46.2
Duzib205G0409 Durio zibethinus HOM05D000905 ORTHO05D000749 3.7e-07 58.9 94 47.9
TWI18G0632 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 3.7e-07 58.9 101 43.6
Cpa.g.sc35.15 Carica papaya HOM05D000905 ORTHO05D000749 4.8e-07 58.5 103 44.7
PSO161G0030 Papaver somniferum HOM05D000905 ORTHO05D000749 4.8e-07 58.5 93 43.0
TWI75G0273 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 6.2e-07 58.2 93 40.9
vmacro16301 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 6.2e-07 58.2 101 42.6
Lj5C119T11 Lonicera japonica HOM05D000905 ORTHO05D000749 1.1e-06 57.4 90 42.2
TWI36G1165 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 1.1e-06 57.4 93 43.0
Duzib248G0481 Durio zibethinus HOM05D000905 ORTHO05D000749 1.4e-06 57.0 99 39.4
PGSC0003DMG400024575 Solanum tuberosum HOM05D000905 ORTHO05D000749 1.4e-06 57.0 101 43.6
Nitab4.5_0008162g0030 Nicotiana tabacum HOM05D000905 ORTHO05D000749 2.4e-06 56.2 93 46.2
Oeu041593.1 Olea europaea HOM05D000905 ORTHO05D000749 2.4e-06 56.2 98 43.9
Ca_05077_v3 Cicer arietinum L. HOM05D000905 ORTHO05D000749 3.1e-06 55.8 95 44.2
Peaxi162Scf00828g00210 Petunia axillaris HOM05D000905 ORTHO05D000749 3.1e-06 55.8 92 41.3
Medtr5g036950 Medicago truncatula HOM05D000905 ORTHO05D000749 4.0e-06 55.5 93 46.2
CSS0005619 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 5.3e-06 55.1 100 41.0
CSS0027929 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 5.3e-06 55.1 100 41.0
AUR62008301 Chenopodium quinoa HOM05D000905 ORTHO05D000749 5.3e-06 55.1 93 43.0
Eucgr.B03382 Eucalyptus grandis HOM05D000905 ORTHO05D000749 5.3e-06 55.1 101 43.6
Sopen03g032730 Solanum pennellii HOM05D000905 ORTHO05D000749 5.3e-06 55.1 101 43.6
TWI15G0950 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 5.3e-06 55.1 101 42.6
EL10Ac5g10862 Beta vulgaris HOM05D000905 ORTHO05D000749 6.9e-06 54.7 93 43.0
Solyc03g113680.4 Solanum lycopersicum HOM05D000905 ORTHO05D000749 6.9e-06 54.7 101 43.6
PSO832G0782 Papaver somniferum HOM05D000905 ORTHO05D000749 9.0e-06 54.3 106 37.7


User provided reference genes

Program Settings