Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 3.6e-150 535.0 296 100.0
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 9.6e-95 350.9 233 87.6
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 5.1e-72 275.4 230 72.6
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.5e-71 273.9 236 70.8
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.3e-71 272.3 237 67.5
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.8e-69 266.9 244 67.2
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.2e-68 264.2 254 63.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.5e-68 263.8 233 68.7
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 5.8e-68 261.9 232 69.0
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.3e-67 260.8 235 68.1
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 2.2e-67 260.0 232 68.5
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.2e-67 260.0 238 66.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 2.9e-67 259.6 234 68.4
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.1e-66 257.7 231 67.1
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.4e-66 257.3 286 57.7
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 3.2e-66 256.1 245 64.9
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 9.3e-66 254.6 237 65.8
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.6e-65 253.8 238 65.5
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.6e-65 253.8 236 66.5
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.0e-64 251.1 237 66.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.3e-64 250.0 237 67.1
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 3.0e-64 249.6 236 64.0
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.0e-64 249.6 234 65.4
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 3.9e-64 249.2 234 64.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 8.7e-64 248.1 235 63.8
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 2.5e-63 246.5 197 73.1
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.5e-63 246.5 238 63.9
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.3e-63 246.1 235 64.3
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 5.7e-63 245.4 233 64.4
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 7.4e-63 245.0 233 63.5
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 6.3e-62 241.9 245 64.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 8.2e-62 241.5 233 61.8
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 8.2e-62 241.5 235 63.8
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.8e-61 240.4 236 62.3
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.4e-61 240.0 234 63.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 4.1e-61 239.2 196 69.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 4.1e-61 239.2 241 60.6
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.1e-61 239.2 241 61.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 6.9e-61 238.4 201 68.7
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 9.0e-61 238.0 227 61.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.6e-60 236.5 237 62.0
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.4e-60 236.1 242 59.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.0e-59 234.6 220 63.6
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.3e-59 234.2 238 60.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.7e-59 233.8 234 60.3
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.9e-59 233.0 198 68.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 5.0e-59 232.3 217 63.6
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.1e-58 231.1 227 60.8
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.5e-58 229.9 233 63.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.2e-58 229.6 199 62.3
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 4.2e-58 229.2 199 68.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.6e-57 227.3 234 61.1
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 3.6e-57 226.1 198 62.1
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.6e-57 226.1 234 60.7
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 6.1e-57 225.3 198 62.1
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.8e-56 223.8 235 61.7
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.0e-56 223.0 196 67.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.7e-56 221.9 202 65.8
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.7e-56 221.9 202 65.8
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-55 221.1 202 64.9
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.1e-55 221.1 222 61.3
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.5e-55 219.9 230 59.6
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.5e-55 219.9 202 64.9
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 3.3e-55 219.5 237 59.5
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.3e-55 219.5 214 63.1
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 9.7e-55 218.0 235 57.4
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.8e-54 216.5 174 72.4
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.7e-54 216.1 230 57.4
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.1e-53 214.5 220 60.9
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.1e-53 214.5 233 58.8
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.8e-53 213.8 230 58.3
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 2.4e-53 213.4 230 57.8
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.1e-53 213.0 238 56.3
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 5.3e-53 212.2 181 69.6
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 9.1e-53 211.5 230 57.4
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.6e-52 209.9 235 56.6
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 7.7e-52 208.4 188 64.4
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.3e-51 207.6 170 67.1
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.3e-51 207.6 235 56.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.7e-51 207.2 231 56.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 5.0e-51 205.7 174 63.8
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.5e-51 205.3 241 56.4
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 8.5e-51 204.9 233 55.8
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.4e-50 204.1 218 56.4
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.9e-50 203.8 234 55.6
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 2.5e-50 203.4 252 52.4
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 3.2e-50 203.0 214 57.0
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 4.2e-50 202.6 234 55.1
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 5.5e-50 202.2 233 56.2
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 5.5e-50 202.2 234 55.1
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.2e-49 201.1 233 56.2
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.2e-49 201.1 223 55.2
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.2e-49 201.1 180 62.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.2e-49 201.1 201 59.7
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 3.6e-49 199.5 174 63.2
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 7.9e-49 198.4 148 73.6
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.0e-48 198.0 201 58.7
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.0e-48 196.4 147 74.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 3.0e-48 196.4 256 51.6
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.1e-47 194.5 259 51.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 9.7e-47 191.4 216 56.0
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.7e-46 190.7 134 74.6
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 4.8e-46 189.1 224 54.9
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 4.8e-46 189.1 230 53.9
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 3.4e-44 183.0 168 61.3
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 6.5e-43 178.7 188 61.2
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.4e-42 177.6 174 60.9
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.2e-41 174.5 177 63.3
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.6e-41 174.1 137 69.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 6.1e-41 172.2 173 62.4
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.0e-39 167.2 202 56.9
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.8e-37 160.6 198 56.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.8e-32 144.1 173 49.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 8.8e-32 141.7 140 60.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 3.7e-30 136.3 128 60.9
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.7e-30 136.3 144 52.8
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.4e-29 133.7 128 59.4
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.5e-26 123.6 158 48.7
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.0e-24 116.7 181 41.4
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 2.0e-20 104.0 104 53.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 4.7e-17 92.8 75 64.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.8e-16 90.9 106 48.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 7.5e-15 85.5 105 47.6
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-14 84.0 94 56.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.8e-08 64.3 66 56.1


User provided reference genes

Program Settings