Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 1.7e-123 446.0 225 100.0
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 2.3e-96 355.9 217 86.2
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 2.8e-86 322.4 300 61.7
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 2.8e-78 295.8 226 70.4
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 3.6e-78 295.4 225 71.6
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 3.1e-77 292.4 225 72.4
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.3e-72 276.9 225 68.0
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 2.3e-72 276.2 221 67.9
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 1.7e-67 260.0 197 70.1
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 4.0e-61 238.8 243 58.8
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.1e-57 226.5 184 66.3
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 4.6e-57 225.3 216 58.3
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 6.0e-57 224.9 185 67.0
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 7.9e-57 224.6 189 64.6
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 1.0e-56 224.2 238 55.9
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 1.3e-56 223.8 226 57.1
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 1.3e-56 223.8 185 67.6
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 1.7e-56 223.4 159 72.3
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.3e-56 223.0 145 78.6
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 3.0e-56 222.6 181 68.0
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 3.9e-56 222.2 168 70.2
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.7e-56 221.1 145 77.9
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 1.5e-55 220.3 153 74.5
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.3e-55 219.2 145 77.2
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.6e-54 216.9 136 78.7
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 2.8e-54 216.1 171 69.0
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 4.8e-54 215.3 184 63.6
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.4e-53 213.8 170 65.9
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 5.3e-53 211.8 231 55.4
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 1.2e-52 210.7 165 70.3
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.2e-52 210.7 165 70.3
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.8e-52 208.4 165 69.7
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 9.9e-52 207.6 143 72.0
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 1.3e-51 207.2 166 65.7
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.3e-51 207.2 169 67.5
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 2.2e-51 206.5 176 62.5
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 2.9e-51 206.1 176 63.1
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.8e-51 205.7 182 62.1
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 3.8e-51 205.7 170 62.9
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 6.4e-51 204.9 160 66.2
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 6.4e-51 204.9 143 71.3
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 8.4e-51 204.5 169 65.7
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 1.1e-50 204.1 169 67.5
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 2.4e-50 203.0 169 65.1
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 2.4e-50 203.0 170 61.8
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 3.2e-50 202.6 126 78.6
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 3.2e-50 202.6 170 61.8
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 4.2e-50 202.2 169 61.5
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 7.1e-50 201.4 168 64.3
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 9.3e-50 201.1 212 54.2
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 9.3e-50 201.1 182 60.4
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 1.2e-49 200.7 182 60.4
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.6e-49 200.3 131 76.3
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 2.1e-49 199.9 151 67.5
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 2.7e-49 199.5 194 55.7
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.7e-49 199.5 185 59.5
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 2.7e-49 199.5 133 71.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 7.9e-49 198.0 154 68.2
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 7.9e-49 198.0 179 57.5
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.8e-48 196.8 174 62.1
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.8e-48 196.8 139 70.5
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.8e-48 196.8 145 67.6
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 2.3e-48 196.4 162 63.6
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 5.1e-48 195.3 160 64.4
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 2.5e-47 193.0 163 61.3
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 9.6e-47 191.0 148 65.5
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 6.2e-46 188.3 120 80.8
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 8.1e-46 188.0 173 58.4
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 6.9e-45 184.9 200 52.5
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 1.2e-44 184.1 117 78.6
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 7.6e-44 181.4 115 78.3
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 8.4e-43 177.9 165 60.0
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 1.9e-42 176.8 127 73.2
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 4.2e-42 175.6 121 76.0
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 9.3e-42 174.5 210 52.9
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 2.1e-41 173.3 161 56.5
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 7.9e-41 171.4 143 68.5
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 5.1e-40 168.7 117 73.5
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.6e-38 163.7 128 60.9
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 1.1e-37 161.0 143 58.0
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 8.4e-35 151.4 121 62.0
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 7.2e-34 148.3 120 61.7
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 7.2e-34 148.3 92 82.6
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 1.6e-33 147.1 92 77.2
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 3.5e-33 146.0 157 53.5
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.5e-33 146.0 169 55.0
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 3.9e-32 142.5 122 65.6
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 3.9e-32 142.5 121 58.7
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.1e-31 141.0 83 84.3
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 9.7e-31 137.9 102 71.6
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.8e-30 136.3 145 55.2
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 6.3e-30 135.2 124 59.7
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 8.2e-30 134.8 101 72.3
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.2e-30 134.8 94 73.4
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 7.7e-28 128.3 102 68.6
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 1.9e-26 123.6 71 84.5
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.5e-26 123.2 83 75.9
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 1.5e-23 114.0 80 71.2
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.8e-22 109.8 169 46.2
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 5.0e-19 99.0 92 56.5
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 3.2e-18 96.3 49 93.9
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 1.6e-17 94.0 115 47.0
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 8.8e-16 88.2 70 65.7
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 9.7e-15 84.7 124 42.7
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 2.2e-11 73.6 126 38.1
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 1.2e-09 67.8 91 49.5
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 2.7e-09 66.6 124 30.6
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 1.0e-08 64.7 179 28.5
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 2.3e-08 63.5 117 30.8
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 8.8e-08 61.6 123 30.1
Pp3c2_11540 Physcomitrium patens HOM05D009116 ORTHO05D011299 1.1e-07 61.2 119 33.6
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 1.5e-07 60.8 158 30.4
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 2.0e-07 60.5 159 30.8
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 2.0e-07 60.5 176 29.0
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 4.4e-07 59.3 151 30.5
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 4.4e-07 59.3 161 30.4
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 5.7e-07 58.9 177 27.7
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 5.7e-07 58.9 167 28.1
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 1.3e-06 57.8 198 27.3
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 3.7e-06 56.2 124 33.1


User provided reference genes

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