Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 1.4e-273 945.7 485 100.0
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 3.1e-252 874.8 489 92.2
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 5.5e-241 837.4 489 87.5
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 7.8e-219 763.8 462 84.6
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.2e-214 750.0 488 79.5
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 3.2e-212 741.9 501 77.4
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 1.6e-208 729.6 490 78.0
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 1.4e-204 716.5 489 76.1
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 7.0e-204 714.1 457 79.9
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 3.9e-202 708.4 486 76.1
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 5.8e-198 694.5 486 73.3
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 4.9e-197 691.4 486 73.0
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 9.6e-185 650.6 487 71.7
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 5.6e-169 598.2 495 62.2
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 5.6e-169 598.2 484 63.4
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 9.6e-169 597.4 487 63.2
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.6e-168 596.7 484 63.2
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 1.1e-167 594.0 486 63.6
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 9.0e-167 590.9 484 62.6
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 1.2e-166 590.5 500 63.0
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 7.6e-166 587.8 484 63.0
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 9.9e-166 587.4 485 63.3
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.2e-164 582.4 490 61.0
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.2e-164 582.4 488 62.9
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 1.6e-163 580.1 497 60.2
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 1.6e-163 580.1 497 61.0
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.1e-163 579.7 517 60.9
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 6.7e-162 574.7 437 66.6
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 8.7e-162 574.3 501 60.3
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.9e-161 573.2 491 61.5
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 2.5e-161 572.8 497 60.4
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 7.4e-161 571.2 494 61.5
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 9.6e-161 570.9 464 64.2
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 8.2e-160 567.8 486 62.1
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.1e-159 567.4 493 61.3
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 2.0e-158 563.1 462 63.9
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 5.5e-156 555.1 497 59.2
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 3.5e-155 552.4 490 59.6
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.0e-154 550.8 493 59.0
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 1.0e-154 550.8 488 59.2
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 1.8e-154 550.1 486 60.1
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 6.7e-154 548.1 436 63.1
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 7.4e-153 544.7 496 56.7
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 1.6e-152 543.5 490 59.0
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 8.2e-152 541.2 449 62.8
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.1e-151 540.8 491 58.9
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.8e-151 540.0 488 56.6
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 1.0e-149 534.3 488 56.6
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.3e-149 533.9 487 56.9
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.3e-149 533.9 493 57.4
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 2.9e-149 532.7 485 60.6
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 2.5e-148 529.6 494 56.3
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 1.2e-147 527.3 485 58.6
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 4.6e-147 525.4 565 52.2
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.8e-146 523.5 494 57.9
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 6.7e-146 521.5 487 57.7
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 4.8e-144 515.4 403 63.5
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 8.2e-144 514.6 494 54.7
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 3.1e-143 512.7 494 54.7
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 6.9e-143 511.5 479 55.3
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 2.0e-142 510.0 492 54.7
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 2.0e-142 510.0 503 53.9
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 2.1e-139 500.0 485 56.7
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 4.7e-139 498.8 445 56.4
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 6.1e-139 498.4 495 53.9
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.5e-137 493.8 478 53.8
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.6e-137 493.0 450 57.1
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 5.7e-137 491.9 490 54.1
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 9.7e-137 491.1 517 52.2
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 6.3e-136 488.4 433 57.5
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 8.2e-136 488.0 487 52.8
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.6e-134 483.0 392 63.8
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 2.2e-133 479.9 484 53.5
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 2.9e-133 479.6 490 53.3
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 3.8e-133 479.2 485 53.0
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 5.0e-133 478.8 489 53.0
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.4e-132 477.2 485 53.0
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 5.5e-132 475.3 495 52.3
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 8.8e-130 468.0 494 53.2
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.6e-129 466.5 541 49.4
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 9.7e-129 464.5 496 51.0
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 9.7e-129 464.5 490 52.4
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 1.7e-128 463.8 495 51.9
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 2.8e-128 463.0 361 65.1
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 8.2e-128 461.5 490 52.0
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 2.4e-127 459.9 491 52.3
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 4.1e-127 459.1 488 52.3
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 2.2e-125 453.4 492 51.8
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 6.5e-125 451.8 490 51.0
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 6.5e-125 451.8 490 51.0
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 6.5e-125 451.8 385 60.5
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 5.7e-121 438.7 498 48.0
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 2.8e-120 436.4 519 47.4
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.2e-117 426.8 489 49.9
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 2.5e-116 423.3 359 62.1
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 2.5e-116 423.3 351 61.0
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 6.1e-115 418.7 396 55.6
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.2e-110 404.4 485 45.2
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 3.5e-110 402.9 485 44.9
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.1e-99 367.1 479 44.1
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 2.2e-96 357.1 396 49.5
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 6.6e-93 345.5 488 42.4
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 1.1e-90 338.2 349 53.3
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.8e-90 337.4 495 43.0
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 3.7e-88 329.7 250 68.4
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 1.7e-72 277.7 494 36.8
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 5.1e-69 266.2 236 59.7
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 6.9e-66 255.8 430 36.3
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.4e-65 253.4 287 48.4
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 5.1e-61 239.6 270 48.9
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.4e-58 231.5 184 63.0
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 4.9e-56 223.0 170 62.4
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.1e-55 221.9 409 36.2
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 2.3e-53 214.2 349 40.4
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.8e-50 204.5 275 42.5
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 6.7e-45 186.0 231 45.0
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 9.0e-42 175.6 282 40.8
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 7.6e-41 172.6 134 61.9
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 3.8e-40 170.2 108 72.2
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.5e-38 163.7 135 60.0
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 1.5e-36 158.3 361 33.2
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 2.4e-34 151.0 384 28.4
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 5.3e-34 149.8 171 48.0
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 9.0e-34 149.1 257 38.9
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.4e-26 125.2 130 50.8
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.9e-26 122.9 139 48.9
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 8.5e-24 115.9 162 46.3
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 8.5e-24 115.9 136 49.3
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 4.7e-22 110.2 109 55.0
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 3.7e-11 73.9 106 38.7
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 5.3e-10 70.1 109 41.3
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 6.5e-08 63.2 238 24.8
Pp3c4_19380 Physcomitrium patens HOM05D005719 ORTHO05D007030 8.0e-06 56.2 66 45.5


User provided reference genes

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