Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G081300 Glycine max HOM05D004081 ORTHO05D025646 1.1e-44 183.0 94 100.0
Glyma.06G083000 Glycine max HOM05D004081 ORTHO05D004935 4.3e-17 91.3 54 85.2
Glyma.04G081400 Glycine max HOM05D004081 ORTHO05D004935 9.7e-17 90.1 56 83.9
Glyma.06G083100 Glycine max HOM05D004081 ORTHO05D004935 9.0e-15 83.6 54 77.8
Phvul.009G106100 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 2.1e-11 72.4 54 70.4
Ca_15610_v3 Cicer arietinum L. HOM05D004081 ORTHO05D004935 1.8e-10 69.3 58 65.5
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 3.9e-10 68.2 53 71.7
Lj1g0015510 Lotus japonicus HOM05D004081 ORTHO05D004935 6.7e-10 67.4 54 66.7
Glyma.04G081501 Glycine max HOM05D004081 ORTHO05D025646 2.0e-09 65.9 55 65.5
arahy.Tifrunner.gnm1.ann1.QHLN3W Arachis hypogaea HOM05D004081 ORTHO05D004935 3.3e-09 65.1 48 68.8
VMungo1309G1316 Vigna mungo HOM05D004081 ORTHO05D004935 7.4e-09 63.9 52 65.4
arahy.Tifrunner.gnm1.ann1.Y1FCW9 Arachis hypogaea HOM05D004081 ORTHO05D004935 9.7e-09 63.5 48 66.7
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 2.8e-08 62.0 52 55.8
Duzib168G0078 Durio zibethinus HOM05D004081 ORTHO05D004935 4.8e-08 61.2 42 69.0
QL12p029513 Quercus lobata HOM05D004081 ORTHO05D004935 3.1e-07 58.5 55 56.4
MD15G1096200 Malus domestica HOM05D004081 ORTHO05D025646 4.1e-07 58.2 49 65.3
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 4.1e-07 58.2 39 69.2
TPR.G1357 Trifolium pratense HOM05D004081 ORTHO05D004935 4.1e-07 58.2 56 60.7
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 5.3e-07 57.8 49 57.1
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 9.1e-07 57.0 53 58.5
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 9.1e-07 57.0 53 56.6
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 4.5e-06 54.7 48 58.3
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 5.9e-06 54.3 37 67.6
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 5.9e-06 54.3 49 55.1
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 5.9e-06 54.3 49 55.1


User provided reference genes

Program Settings