Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 2.1e-163 578.9 293 100.0
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 8.7e-157 557.0 293 95.9
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.5e-142 508.4 295 88.1
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 1.5e-140 503.1 295 85.4
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 4.3e-140 501.5 293 85.7
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 9.7e-140 500.4 293 87.7
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.1e-138 495.4 293 84.6
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 2.6e-137 492.3 290 85.2
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.0e-133 480.3 295 82.4
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.5e-132 475.7 297 80.5
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 6.9e-130 467.6 293 79.2
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 5.0e-128 461.5 293 77.8
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.4e-125 453.4 295 76.3
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.1e-124 450.3 295 75.6
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-124 450.3 293 75.4
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-124 450.3 293 75.4
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.5e-124 449.9 295 75.3
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.0e-124 449.5 292 77.7
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 9.7e-124 447.2 293 75.1
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 2.2e-123 446.0 295 75.9
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 2.4e-122 442.6 290 75.2
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.5e-121 439.9 295 73.9
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.5e-121 439.9 291 73.5
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.6e-121 439.1 295 74.6
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 7.7e-121 437.6 294 74.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.2e-120 436.0 295 73.9
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.9e-120 435.6 295 74.2
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 3.8e-120 435.3 294 73.5
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 3.8e-120 435.3 291 72.2
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.8e-120 435.3 280 77.5
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.5e-120 434.5 295 74.2
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.1e-119 433.7 303 72.3
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.9e-119 433.0 305 72.8
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 7.2e-119 431.0 300 73.3
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 9.4e-119 430.6 294 72.4
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 9.4e-119 430.6 293 73.0
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 9.4e-119 430.6 304 71.7
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 4.7e-118 428.3 287 73.5
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 6.1e-118 427.9 289 73.7
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 6.1e-118 427.9 308 71.4
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.8e-117 426.4 294 72.4
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.3e-117 426.0 293 72.0
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.3e-117 426.0 293 74.7
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.0e-117 425.6 304 71.4
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 8.8e-117 424.1 293 72.4
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.5e-116 423.3 308 70.8
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 3.3e-116 422.2 276 75.4
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 5.7e-116 421.4 298 72.5
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 5.7e-116 421.4 296 69.9
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.3e-115 420.2 276 75.4
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 3.7e-115 418.7 284 71.5
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 1.8e-114 416.4 297 70.4
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.8e-114 416.4 308 68.8
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.8e-114 416.4 317 67.5
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.8e-114 416.4 296 72.6
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.1e-114 414.1 292 70.9
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.6e-113 412.5 371 58.5
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.6e-113 412.5 295 70.8
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.5e-113 412.1 291 71.5
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 4.5e-113 411.8 293 72.4
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 4.5e-113 411.8 280 75.7
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 4.5e-113 411.8 301 67.4
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 5.9e-113 411.4 278 72.7
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 7.7e-113 411.0 311 67.5
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 2.2e-112 409.5 292 71.2
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 3.8e-112 408.7 295 71.9
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 3.8e-112 408.7 296 69.6
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 5.0e-112 408.3 292 71.9
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 6.5e-112 407.9 300 68.7
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 8.5e-112 407.5 292 71.9
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 8.5e-112 407.5 293 69.6
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.1e-111 407.1 293 71.0
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.1e-111 407.1 293 70.0
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.1e-111 407.1 293 69.3
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 3.6e-110 402.1 293 68.6
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 4.7e-110 401.7 278 75.5
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.1e-110 401.4 293 70.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 6.1e-110 401.4 302 67.2
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 6.1e-110 401.4 292 69.9
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 8.0e-110 401.0 293 67.2
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.2e-108 397.1 277 74.7
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.2e-108 397.1 290 68.6
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 2.0e-108 396.4 294 70.4
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.0e-108 396.4 293 70.3
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 4.4e-108 395.2 294 70.4
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 9.7e-108 394.0 296 67.6
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 1.7e-107 393.3 294 70.7
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 1.7e-107 393.3 294 70.7
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.1e-106 390.6 302 64.9
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 1.4e-106 390.2 292 69.9
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 5.9e-105 384.8 274 70.8
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 7.7e-105 384.4 285 68.8
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.5e-103 379.4 294 68.7
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.1e-102 376.3 281 67.3
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 3.6e-102 375.6 272 71.0
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 4.7e-102 375.2 299 66.2
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.2e-100 370.5 445 48.3
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.8e-98 363.2 245 73.1
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.7e-96 356.7 254 74.0
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 2.5e-95 352.8 293 64.5
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.8e-93 346.7 276 63.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.2e-92 344.0 276 62.7
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 2.9e-88 329.3 284 61.6
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.1e-87 327.4 259 64.5
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 1.6e-86 323.6 291 60.1
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 2.8e-86 322.8 206 75.7
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.4e-82 308.5 210 71.9
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.6e-81 307.0 204 74.0
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.3e-80 303.1 292 56.2
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 6.6e-80 301.6 286 53.8
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 8.6e-80 301.2 259 60.6
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.1e-79 300.8 292 56.2
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 9.5e-79 297.7 275 58.9
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 3.4e-76 289.3 300 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 4.1e-74 282.3 273 52.0
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 8.6e-72 274.6 272 53.3
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 2.3e-69 266.5 287 49.8
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 6.4e-67 258.5 268 48.5
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 8.3e-67 258.1 277 50.2
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.9e-66 256.9 166 74.1
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.0e-64 251.1 165 74.5
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 3.3e-63 246.1 252 56.0
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.6e-62 242.7 272 49.6
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 8.1e-62 241.5 273 49.8
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-61 240.7 165 72.1
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.9e-55 220.3 169 68.6
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 2.4e-50 203.4 265 47.5
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 7.1e-50 201.8 214 55.1
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.0e-40 169.9 117 71.8
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 3.3e-39 166.4 135 64.4
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-34 151.4 133 60.2
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.5e-20 102.8 96 57.3
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 8.5e-19 98.6 130 45.4
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 7.4e-15 85.5 241 36.1
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 6.7e-08 62.4 53 52.8
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 2.6e-07 60.5 178 35.4


User provided reference genes

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