Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.9e-112 409.1 195 100.0
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 7.9e-106 387.1 195 95.4
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 5.5e-99 364.4 195 89.7
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.7e-95 352.8 201 84.6
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 8.2e-95 350.5 196 88.3
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 5.0e-92 341.3 196 84.7
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 6.5e-92 340.9 222 77.0
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 6.5e-92 340.9 195 83.1
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 8.5e-92 340.5 195 84.6
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 9.4e-91 337.0 206 82.5
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.6e-90 336.3 195 82.6
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.5e-88 329.7 193 82.9
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 2.8e-87 325.5 195 80.5
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.8e-87 325.5 195 80.0
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.7e-87 325.1 195 80.5
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.1e-86 323.6 195 80.0
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.2e-85 320.1 196 80.6
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 2.7e-85 318.9 202 76.7
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 5.9e-85 317.8 170 86.5
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.3e-84 316.6 209 74.2
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 2.9e-84 315.5 196 78.6
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 6.5e-84 314.3 200 77.0
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 8.5e-84 313.9 202 75.7
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 8.5e-84 313.9 171 84.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.5e-83 313.2 171 84.2
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.5e-83 313.2 202 77.2
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.2e-82 310.1 178 79.8
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.2e-82 310.1 204 73.5
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 6.1e-82 307.8 173 81.5
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 2.3e-81 305.8 195 75.4
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.3e-81 305.8 171 81.9
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 4.0e-81 305.1 197 76.6
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 6.8e-81 304.3 166 84.3
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 6.8e-81 304.3 171 81.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 8.8e-81 303.9 198 74.7
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.0e-80 302.8 200 75.0
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 2.0e-80 302.8 179 78.8
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.6e-80 302.4 196 75.5
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 2.6e-80 302.4 179 78.2
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 4.4e-80 301.6 201 70.6
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 5.7e-80 301.2 167 80.8
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 7.5e-80 300.8 195 73.8
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 9.8e-80 300.4 197 74.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 2.2e-79 299.3 167 79.6
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 2.8e-79 298.9 199 70.4
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 3.7e-79 298.5 201 71.1
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 4.8e-79 298.1 170 79.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 4.8e-79 298.1 197 72.6
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 6.3e-79 297.7 201 71.1
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 6.3e-79 297.7 201 71.1
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 6.3e-79 297.7 201 71.1
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 6.3e-79 297.7 201 71.1
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 8.3e-79 297.4 200 70.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 1.4e-78 296.6 167 79.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.4e-78 296.6 195 72.8
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.8e-78 296.2 212 69.3
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.8e-78 296.2 195 74.4
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.4e-78 295.8 201 70.1
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 3.1e-78 295.4 171 78.9
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.0e-77 292.7 203 68.5
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 3.5e-77 292.0 173 75.7
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 1.7e-76 289.7 185 72.4
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.7e-76 289.7 167 79.6
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.3e-76 289.3 185 72.4
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.3e-76 289.3 171 76.0
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.3e-76 289.3 174 78.2
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 2.9e-76 288.9 198 70.7
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.8e-76 288.5 165 80.0
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 3.8e-76 288.5 198 70.7
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 5.0e-76 288.1 211 66.8
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 8.6e-76 287.3 207 68.1
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.1e-75 287.0 198 69.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.2e-75 285.4 174 78.7
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.2e-74 283.5 208 67.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 6.1e-74 281.2 200 69.0
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.4e-73 280.0 197 70.6
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 3.0e-73 278.9 198 68.7
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 5.2e-73 278.1 194 69.1
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 6.8e-73 277.7 198 67.2
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 6.8e-73 277.7 185 71.9
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 2.0e-69 266.2 169 72.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.6e-66 256.5 161 77.0
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 4.7e-66 255.0 163 73.6
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 4.0e-65 251.9 144 81.9
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 5.2e-65 251.5 140 80.0
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 6.8e-65 251.1 167 69.5
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 4.4e-64 248.4 138 81.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 5.7e-64 248.1 141 78.7
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 4.9e-63 245.0 146 78.8
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 4.1e-62 241.9 181 63.0
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 9.2e-62 240.7 147 78.9
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 4.6e-61 238.4 137 79.6
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.3e-60 236.9 167 67.7
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.5e-56 223.4 151 66.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.7e-55 218.8 196 55.6
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.1e-54 217.2 161 65.8
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.6e-53 213.4 111 87.4
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.0e-53 213.0 152 65.8
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 4.1e-46 188.7 160 55.6
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 8.6e-44 181.0 138 63.8
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.7e-31 140.2 134 47.8
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.2e-15 86.7 168 36.9
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.6e-10 70.5 37 81.1
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.8e-09 67.0 133 33.8
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 1.1e-06 57.8 155 23.9
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 5.5e-06 55.5 137 31.4


User provided reference genes

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