Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 1.5e-122 443.0 244 100.0
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 2.0e-98 362.8 243 84.4
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.6e-98 362.5 243 83.1
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 2.5e-88 329.3 251 76.9
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 3.5e-87 325.5 237 75.1
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.0e-86 323.9 249 75.1
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 3.3e-85 318.9 252 75.4
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 2.4e-83 312.8 250 73.6
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 7.9e-79 297.7 241 70.1
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 2.4e-75 286.2 241 68.5
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 3.1e-75 285.8 242 67.8
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 2.6e-74 282.7 241 66.8
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 3.4e-74 282.3 242 66.9
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 2.2e-73 279.6 239 66.1
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 2.2e-73 279.6 241 65.6
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 3.8e-73 278.9 238 64.7
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 6.5e-73 278.1 243 65.0
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.1e-72 277.3 242 65.3
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.1e-72 277.3 242 65.7
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 3.2e-72 275.8 241 65.1
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 3.6e-71 272.3 241 65.1
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 6.1e-71 271.6 241 64.7
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 2.3e-70 269.6 241 64.3
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 3.0e-70 269.2 241 65.6
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 8.8e-70 267.7 246 63.8
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 7.4e-69 264.6 241 63.5
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 9.7e-69 264.2 242 62.8
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 1.3e-68 263.8 243 61.3
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 4.8e-68 261.9 241 63.9
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 4.8e-68 261.9 240 62.1
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.8e-67 260.0 237 63.7
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 5.3e-67 258.5 239 61.9
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 7.0e-67 258.1 238 62.2
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 7.0e-67 258.1 243 62.6
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 9.1e-67 257.7 241 62.2
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.7e-65 253.4 241 61.4
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 4.2e-64 248.8 232 60.8
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 9.4e-64 247.7 238 59.2
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 2.7e-63 246.1 241 58.9
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 8.0e-63 244.6 245 59.6
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 1.1e-61 240.7 245 59.2
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 4.4e-61 238.8 245 58.0
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.7e-60 236.9 237 57.8
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 4.1e-59 232.3 241 56.8
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 5.3e-59 231.9 245 57.6
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 3.5e-58 229.2 241 55.2
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 6.1e-55 218.4 205 61.0
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 6.1e-55 218.4 242 56.6
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 1.4e-54 217.2 216 61.1
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.2e-53 214.2 252 52.8
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 2.8e-52 209.5 252 53.2
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 1.9e-48 196.8 239 51.5
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 8.0e-47 191.4 235 51.1
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 3.4e-45 186.0 152 66.4
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 6.6e-41 171.8 245 46.5
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 5.7e-37 158.7 238 46.6
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 3.2e-27 126.3 131 53.4
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 1.3e-25 120.9 217 37.3
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 1.0e-09 68.2 224 28.1
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 4.7e-07 59.3 209 29.7
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 8.1e-07 58.5 198 29.8
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 1.4e-06 57.8 198 29.8
AUR62012536 Chenopodium quinoa HOM05D000215 ORTHO05D007108 1.8e-06 57.4 236 26.7
AUR62014659 Chenopodium quinoa HOM05D000215 ORTHO05D007108 1.8e-06 57.4 213 28.2
AUR62044176 Chenopodium quinoa HOM05D000215 ORTHO05D007108 1.8e-06 57.4 213 28.2
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 2.4e-06 57.0 213 27.2
Pp3c9_17040 Physcomitrium patens HOM05D000215 ORTHO05D008904 3.1e-06 56.6 198 26.3
Pp3c9_17047 Physcomitrium patens HOM05D000215 ORTHO05D008904 3.1e-06 56.6 198 26.3
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 4.0e-06 56.2 198 29.8
TWI63G1343 Tripterygium wilfordii HOM05D000215 ORTHO05D007108 6.8e-06 55.5 216 28.7


User provided reference genes

Program Settings