Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G054800 Glycine max HOM05D004557 ORTHO05D005258 5.1e-221 770.8 392 100.0
Glyma.20G016100 Glycine max HOM05D004557 ORTHO05D005258 1.4e-109 400.6 268 77.2
Glyma.06G054951 Glycine max HOM05D004557 ORTHO05D005258 3.8e-83 312.8 192 81.2
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 1.0e-64 251.5 394 40.1
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 8.9e-56 221.9 420 36.9
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 1.8e-53 214.2 344 37.8
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 5.0e-51 206.1 376 34.8
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 1.3e-46 191.4 364 36.5
Phvul.009G080800 Phaseolus vulgaris HOM05D004557 ORTHO05D005258 2.7e-44 183.7 364 36.5
Glyma.06G054900 Glycine max HOM05D004557 ORTHO05D005258 6.0e-44 182.6 101 90.1
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 5.0e-43 179.5 294 36.4
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 7.3e-42 175.6 335 32.2
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 6.2e-41 172.6 258 37.2
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 8.1e-41 172.2 254 35.4
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 2.0e-39 167.5 258 34.5
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea HOM05D004557 ORTHO05D005258 2.2e-38 164.1 379 30.9
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 2.2e-38 164.1 251 32.7
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 3.7e-38 163.3 248 37.1
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 5.4e-37 159.5 276 33.7
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 9.2e-37 158.7 272 31.6
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 6.0e-36 156.0 259 32.4
MELO3C011480.2 Cucumis melo HOM05D004557 ORTHO05D005258 3.0e-35 153.7 290 29.3
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.1e-34 151.8 268 31.7
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 1.1e-34 151.8 293 30.4
ClCG08G009910 Citrullus lanatus HOM05D004557 ORTHO05D005258 1.5e-34 151.4 298 30.5
Medtr3g465110 Medicago truncatula HOM05D004557 ORTHO05D005258 1.9e-34 151.0 277 32.5
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 2.5e-34 150.6 269 31.6
Ca_15841_v3 Cicer arietinum L. HOM05D002542 ORTHO05D010145 2.5e-34 150.6 316 31.0
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 3.3e-34 150.2 269 31.6
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 3.3e-34 150.2 269 31.6
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 4.3e-34 149.8 245 33.1
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 9.5e-34 148.7 279 33.3
Cfa018005 Carpinus fangiana HOM05D004557 ORTHO05D005258 2.1e-33 147.5 255 33.3
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 2.1e-33 147.5 289 31.8
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 2.8e-33 147.1 250 32.0
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 2.8e-33 147.1 339 29.2
Potri.006G223100 Populus trichocarpa HOM05D004557 ORTHO05D005258 1.4e-32 144.8 253 32.4
MD15G1052600 Malus domestica HOM05D004557 ORTHO05D005258 1.5e-31 141.4 292 31.8
PSO388G0001 Papaver somniferum HOM05D004557 ORTHO05D005258 4.4e-31 139.8 245 31.4
HanXRQChr09g0248091 Helianthus annuus HOM05D004557 ORTHO05D005258 7.6e-31 139.0 263 29.3
CSS0012791 Camellia sinensis var. sinensis HOM05D004557 ORTHO05D005258 9.9e-31 138.7 244 32.8
PSO210G7071 Papaver somniferum HOM05D004557 ORTHO05D005258 2.9e-30 137.1 281 32.7
Lsat_1_v5_gn_7_60080 Lactuca sativa HOM05D004557 ORTHO05D005258 6.4e-30 136.0 203 33.5
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 1.4e-29 134.8 249 29.7
Prupe.1G406500 Prunus persica HOM05D004557 ORTHO05D005258 1.4e-29 134.8 271 30.6
Cpa.g.sc126.43 Carica papaya HOM05D004557 ORTHO05D005258 2.4e-29 134.0 210 33.3
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 2.4e-29 134.0 256 28.5
Dinv06254 Davidia involucrata HOM05D004557 ORTHO05D005258 4.1e-29 133.3 280 29.3
Dinv15528 Davidia involucrata HOM05D004557 ORTHO05D005258 4.1e-29 133.3 280 29.3
Dinv29489 Davidia involucrata HOM05D004557 ORTHO05D005258 7.1e-29 132.5 280 28.9
COL.COLO4_37167 Corchorus olitorius HOM05D004557 ORTHO05D005258 2.1e-28 131.0 242 30.2
Rhsim01G0109000 Rhododendron simsii HOM05D004557 ORTHO05D005258 2.7e-28 130.6 226 32.7
SGA_v2.0_scaffold20G09180 Striga asiatica HOM05D004557 ORTHO05D005258 2.7e-28 130.6 266 28.9
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 6.0e-28 129.4 278 28.1
Aqoxy7G01097 Aquilegia oxysepala HOM05D004557 ORTHO05D005258 7.8e-28 129.0 365 26.3
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 8.6e-27 125.6 279 28.0
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 8.6e-27 125.6 266 30.1
A10p22940 Brassica napus HOM05D004557 ORTHO05D005258 3.3e-26 123.6 254 29.1
BraA10t44362Z Brassica rapa HOM05D004557 ORTHO05D005258 3.3e-26 123.6 254 29.1
C09p60890 Brassica napus HOM05D004557 ORTHO05D005258 4.3e-26 123.2 254 29.1
BolC9t58932H Brassica oleracea HOM05D004557 ORTHO05D005258 4.3e-26 123.2 254 29.1
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 4.3e-26 123.2 269 28.3
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 2.1e-25 120.9 329 28.6
Atru.chr7.1871 Acer truncatum HOM05D004557 ORTHO05D005258 1.1e-24 118.6 281 30.6
Thhalv10013525m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 1.1e-24 118.6 250 28.8
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 1.8e-24 117.9 272 28.7
Cc08_g01350 Coffea canephora HOM05D004557 ORTHO05D005258 2.6e-23 114.0 246 29.3
unitig_26.g8849 Utricularia gibba HOM05D004557 ORTHO05D005258 3.4e-23 113.6 216 31.0
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 5.8e-23 112.8 258 30.2
Manes.03G052300 Manihot esculenta HOM05D004557 ORTHO05D005258 2.2e-22 110.9 108 45.4
Lj7A235T21 Lonicera japonica HOM05D004557 ORTHO05D005258 2.9e-22 110.5 298 28.2
Actinidia25701 Actinidia chinensis HOM05D004557 ORTHO05D005258 3.8e-22 110.2 318 29.6
FAN06G3367 Fragaria x ananassa HOM05D004557 ORTHO05D005258 8.4e-22 109.0 256 28.9
SGA_v2.0_scaffold98G29377 Striga asiatica HOM05D004557 ORTHO05D005258 1.4e-21 108.2 267 28.8
TWI34G1499 Tripterygium wilfordii HOM05D004557 ORTHO05D005258 2.4e-21 107.5 119 41.2
TAR383G0817 Trochodendron aralioides HOM05D004557 ORTHO05D005258 3.2e-21 107.1 212 29.2
HPP92_024782 Vanilla planifolia HOM05D004557 ORTHO05D005258 2.1e-20 104.4 256 25.4
BcaNung02221 Brassica carinata HOM05D004557 ORTHO05D005258 6.0e-20 102.8 221 29.0
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 6.0e-20 102.8 229 29.3
SalBow5G2684 Salvia bowleyana HOM05D004557 ORTHO05D005258 7.8e-20 102.4 245 28.2
Carub.0008s1244 Capsella rubella HOM05D004557 ORTHO05D005258 1.0e-19 102.1 297 25.3
DCAR_000813 Daucus carota HOM05D004557 ORTHO05D005258 3.0e-19 100.5 221 29.0
Nitab4.5_0004953g0040 Nicotiana tabacum HOM05D002542 ORTHO05D010145 3.0e-19 100.5 225 25.8
BcaC03g18467 Brassica carinata HOM05D004557 ORTHO05D005258 6.6e-19 99.4 236 27.1
C02p08140 Brassica napus HOM05D004557 ORTHO05D005258 6.6e-19 99.4 236 27.1
Aa31LG11G13510 Aethionema arabicum HOM05D004557 ORTHO05D005258 8.7e-19 99.0 396 23.0
CAN.G1245.2 Capsicum annuum HOM05D004557 ORTHO05D005258 8.7e-19 99.0 234 24.4
Nn6g35588 Nelumbo nucifera HOM05D004557 ORTHO05D005258 1.1e-18 98.6 133 34.6
vmacro20759 Vaccinium macrocarpon HOM05D004557 ORTHO05D005258 1.5e-18 98.2 247 28.7
AL6G26980 Arabidopsis lyrata HOM05D004557 ORTHO05D005258 2.5e-18 97.4 257 24.5
BraA02t05309Z Brassica rapa HOM05D004557 ORTHO05D005258 2.5e-18 97.4 236 26.7
Mapoly0049s0118 Marchantia polymorpha HOM05D004557 ORTHO05D005258 4.3e-18 96.7 244 27.5
Rhsim09G0050500 Rhododendron simsii HOM05D004557 ORTHO05D005258 5.6e-18 96.3 239 30.1
BolC2t06737H Brassica oleracea HOM05D004557 ORTHO05D005258 7.3e-18 95.9 237 27.0
A02p03380 Brassica napus HOM05D004557 ORTHO05D005258 1.6e-17 94.7 236 26.3
SGA_v2.0_scaffold64G21858 Striga asiatica HOM05D000448 ORTHO05D000291 2.8e-17 94.0 105 40.0
AT5G16100 Arabidopsis thaliana HOM05D004557 ORTHO05D005258 6.2e-17 92.8 268 25.0
Eucgr.J00345 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.4e-16 90.9 212 28.8
Solyc08g062200.3 Solanum lycopersicum HOM05D002542 ORTHO05D010145 3.1e-16 90.5 290 26.2
DCAR_004388 Daucus carota HOM05D004557 ORTHO05D005258 6.9e-16 89.4 129 36.4
Peaxi162Scf00809g00213 Petunia axillaris HOM05D002542 ORTHO05D010145 1.5e-15 88.2 310 21.9
Sopen08g017790 Solanum pennellii HOM05D004557 ORTHO05D005258 2.6e-15 87.4 213 28.6
Pp3c24_6460 Physcomitrium patens HOM05D004557 ORTHO05D005258 4.5e-15 86.7 326 22.1
Eucgr.L01064 Eucalyptus grandis HOM05D004557 ORTHO05D005258 7.6e-15 85.9 212 29.2
DCAR_004389 Daucus carota HOM05D004557 ORTHO05D005258 3.8e-14 83.6 127 37.0
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 6.4e-14 82.8 183 26.8
CDE05G1912 Ceratophyllum demersum HOM05D004557 ORTHO05D005258 1.9e-13 81.3 218 26.1
AUR62009097 Chenopodium quinoa HOM05D004557 ORTHO05D005258 3.2e-13 80.5 232 23.7
Nitab4.5_0007748g0010 Nicotiana tabacum HOM05D002542 ORTHO05D010145 4.2e-13 80.1 221 22.6
PGSC0003DMG400021751 Solanum tuberosum HOM05D004557 ORTHO05D005258 7.1e-13 79.3 205 27.8
SEGI_37362 Sequoiadendron giganteum HOM05D004557 ORTHO05D005258 9.3e-13 79.0 213 27.2
Oeu037989.1 Olea europaea HOM05D004557 ORTHO05D005258 1.6e-12 78.2 118 35.6
Zm00001eb133740 Zea mays HOM05D004557 ORTHO05D005258 1.6e-12 78.2 240 24.2
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 7.9e-12 75.9 96 39.6
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 3.0e-11 73.9 299 21.4
Eucgr.I02597 Eucalyptus grandis HOM05D004557 ORTHO05D005258 1.5e-10 71.6 94 40.4
Sp6g28040 Schrenkiella parvula HOM05D004557 ORTHO05D005258 2.5e-10 70.9 98 35.7
Eucgr.I00413 Eucalyptus grandis HOM05D004557 ORTHO05D005258 6.2e-09 66.2 212 25.9
CARHR197200 Cardamine hirsuta HOM05D004557 ORTHO05D005258 1.4e-08 65.1 93 35.5
MELO3C016901.2 Cucumis melo HOM05D004557 ORTHO05D005258 9.0e-08 62.4 99 29.3
CARHR197210 Cardamine hirsuta HOM05D004557 ORTHO05D005258 1.2e-07 62.0 98 25.5
Thhalv10009656m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 1.2e-07 62.0 80 32.5
THA.LOC104820951 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 1.5e-07 61.6 57 47.4
CsaV3_4G035930 Cucumis sativus L. HOM05D004557 ORTHO05D005258 2.0e-07 61.2 98 29.6
Actinidia29314 Actinidia chinensis HOM05D004557 ORTHO05D005258 2.6e-07 60.8 47 51.1
CsaV3_4G035940 Cucumis sativus L. HOM05D004557 ORTHO05D005258 2.6e-07 60.8 54 42.6
CBR_g4496 Chara braunii HOM05D004557 ORTHO05D005258 2.9e-06 57.4 272 20.6
MBI13_g11366_MAGBIO Magnolia biondii HOM05D004557 ORTHO05D005258 4.9e-06 56.6 80 40.0


User provided reference genes

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