Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G050500 Glycine max HOM05D001443 ORTHO05D001352 7.1e-201 703.7 362 100.0
VMungo1309G3077 Vigna mungo HOM05D001443 ORTHO05D001352 9.6e-89 331.3 297 65.0
Phvul.009G076800 Phaseolus vulgaris HOM05D001443 ORTHO05D001352 8.1e-80 301.6 293 65.5
VMungo1309G2260 Vigna mungo HOM05D001443 ORTHO05D001352 2.4e-76 290.0 314 57.0
Medtr3g104280 Medicago truncatula HOM05D001443 ORTHO05D001352 6.0e-75 285.4 293 58.4
Phvul.009G076600 Phaseolus vulgaris HOM05D001443 ORTHO05D001352 9.6e-73 278.1 296 58.8
Psat0ss1279g0040 Pisum sativum HOM05D001443 ORTHO05D001352 1.8e-66 257.3 293 55.6
Lalb_Chr22g0356061 Lupinus albus HOM05D001443 ORTHO05D001352 2.0e-62 243.8 301 53.5
Glyma.06G051200 Glycine max HOM05D001443 ORTHO05D001352 1.4e-60 237.7 286 54.2
Glyma.14G093200 Glycine max HOM05D001443 ORTHO05D001352 8.8e-58 228.4 313 53.7
Lalb_Chr14g0367811 Lupinus albus HOM05D001443 ORTHO05D001352 4.5e-54 216.1 254 57.5
Sabra18G0049800 Salix brachista HOM05D001443 ORTHO05D001352 2.9e-53 213.4 304 52.0
Duzib150G1159 Durio zibethinus HOM05D001443 ORTHO05D001352 1.1e-52 211.5 298 48.3
Medtr3g104270 Medicago truncatula HOM05D001443 ORTHO05D001352 4.2e-52 209.5 293 48.5
Manes.16G078700 Manihot esculenta HOM05D001443 ORTHO05D001352 3.3e-49 199.9 293 48.5
Potri.018G055300 Populus trichocarpa HOM05D001443 ORTHO05D001352 1.7e-48 197.6 303 47.2
Glyma.17G230300 Glycine max HOM05D001443 ORTHO05D001352 4.5e-46 189.5 316 47.2
Ciclev10007663m.g Citrus clementina HOM05D001443 ORTHO05D001352 3.8e-45 186.4 301 48.2
COL.COLO4_21036 Corchorus olitorius HOM05D001443 ORTHO05D001352 3.8e-45 186.4 284 48.6
CiPaw.16G029500 Carya illinoinensis HOM05D001443 ORTHO05D001352 8.0e-43 178.7 296 44.6
Lj5g0018193 Lotus japonicus HOM05D001443 ORTHO05D001352 6.7e-42 175.6 316 44.9
Prupe.1G414200 Prunus persica HOM05D001443 ORTHO05D001352 1.1e-41 174.9 324 43.5
CSS0046346 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 2.6e-41 173.7 311 45.3
Potri.006G231800 Populus trichocarpa HOM05D001443 ORTHO05D001352 3.3e-41 173.3 311 45.7
Lalb_Chr24g0399601 Lupinus albus HOM05D001443 ORTHO05D001352 9.7e-41 171.8 298 45.6
MD15G1061600 Malus domestica HOM05D001443 ORTHO05D001352 9.7e-41 171.8 307 42.7
Ca_15868_v3 Cicer arietinum L. HOM05D001443 ORTHO05D001352 4.8e-40 169.5 292 46.6
arahy.Tifrunner.gnm1.ann1.7QGM13 Arachis hypogaea HOM05D001443 ORTHO05D001352 1.1e-39 168.3 290 48.6
Thecc.09G052100 Theobroma cacao HOM05D001443 ORTHO05D001352 1.1e-39 168.3 286 45.5
Sed0026795 Sechium edule HOM05D001443 ORTHO05D001352 5.3e-39 166.0 306 44.1
TWI34G1891 Tripterygium wilfordii HOM05D001443 ORTHO05D001352 5.3e-39 166.0 315 43.8
Dinv27972 Davidia involucrata HOM05D001443 ORTHO05D001352 2.6e-38 163.7 257 49.8
CiPaw.16G029700 Carya illinoinensis HOM05D001443 ORTHO05D001352 3.5e-38 163.3 229 48.5
Psat6g019480 Pisum sativum HOM05D001443 ORTHO05D001352 1.0e-37 161.8 301 44.9
TPR.G3592 Trifolium pratense HOM05D001443 ORTHO05D001352 2.2e-37 160.6 289 42.9
RcHm_v2.0_Chr6g0310631 Rosa chinensis HOM05D001443 ORTHO05D001352 5.0e-37 159.5 262 46.6
arahy.Tifrunner.gnm1.ann1.WC628Y Arachis hypogaea HOM05D001443 ORTHO05D001352 1.1e-36 158.3 297 45.5
MELO3C010761.2 Cucumis melo HOM05D001443 ORTHO05D001352 1.1e-36 158.3 332 41.6
Lj1g0011088 Lotus japonicus HOM05D001443 ORTHO05D001352 1.1e-36 158.3 289 44.6
Manes.16G078600 Manihot esculenta HOM05D001443 ORTHO05D001352 5.5e-36 156.0 296 43.9
arahy.Tifrunner.gnm1.ann1.1JP5NC Arachis hypogaea HOM05D001443 ORTHO05D001352 9.4e-36 155.2 297 45.1
Duzib168G0433 Durio zibethinus HOM05D001443 ORTHO05D001352 4.7e-35 152.9 296 44.9
FAN27G1512 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.8e-34 151.0 285 45.6
Sopen12g031850 Solanum pennellii HOM05D001443 ORTHO05D001352 4.0e-34 149.8 301 41.2
Haze_18206 Corylus avellana HOM05D001443 ORTHO05D001352 2.0e-33 147.5 305 43.3
Solyc12g095960.3 Solanum lycopersicum HOM05D001443 ORTHO05D001352 6.3e-32 142.5 292 39.7
QL02p001442 Quercus lobata HOM05D001443 ORTHO05D001352 1.1e-31 141.7 273 41.0
ClCG08G016950 Citrullus lanatus HOM05D001443 ORTHO05D001352 1.8e-31 141.0 327 39.1
CsaV3_2G025660 Cucumis sativus L. HOM05D001443 ORTHO05D001352 3.1e-31 140.2 328 41.2
Cpa.g.sc7.198 Carica papaya HOM05D001443 ORTHO05D001352 1.2e-30 138.3 287 39.7
Hma1.2p1_0450F.1_g155610 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 1.2e-30 138.3 265 47.5
FvH4_2g32110 Fragaria vesca HOM05D001443 ORTHO05D001352 5.9e-30 136.0 268 45.5
FAN24G0735 Fragaria x ananassa HOM05D002015 ORTHO05D001352 5.9e-30 136.0 268 45.5
CSS0045360 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 1.0e-29 135.2 306 41.8
Gohir.D05G045000 Gossypium hirsutum HOM05D001443 ORTHO05D001352 1.0e-29 135.2 242 43.4
Gorai.009G046100 Gossypium raimondii HOM05D001443 ORTHO05D001352 1.0e-29 135.2 242 43.4
FAN20G1898 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.7e-29 134.4 279 42.7
PGSC0003DMG400029301 Solanum tuberosum HOM05D001443 ORTHO05D001352 3.8e-29 133.3 301 39.2
Gohir.A05G043300 Gossypium hirsutum HOM05D001443 ORTHO05D001352 5.0e-29 132.9 236 43.2
TAR626G0821 Trochodendron aralioides HOM05D001229 ORTHO05D001352 9.4e-28 128.6 326 39.3
TWI32G0683 Tripterygium wilfordii HOM05D001443 ORTHO05D001352 1.4e-26 124.8 297 40.1
Cfa017941 Carpinus fangiana HOM05D001443 ORTHO05D001352 2.3e-26 124.0 305 38.0
TAR383G0280 Trochodendron aralioides HOM05D001443 ORTHO05D001352 2.0e-25 120.9 342 39.2
Lj7C280G0 Lonicera japonica HOM05D001443 ORTHO05D001352 5.7e-25 119.4 287 42.9
DCAR_003086 Daucus carota HOM05D001443 ORTHO05D001352 6.3e-24 115.9 304 36.5
CSS0022594 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 1.1e-23 115.2 302 37.4
MBI04_g37934_MAGBIO Magnolia biondii HOM05D001443 ORTHO05D001352 1.4e-23 114.8 361 34.9
Nitab4.5_0001179g0110 Nicotiana tabacum HOM05D001443 ORTHO05D001352 1.8e-23 114.4 269 37.9
Gohir.A06G088300 Gossypium hirsutum HOM05D001443 ORTHO05D001352 9.1e-23 112.1 315 36.2
Eucgr.C03020 Eucalyptus grandis HOM05D001443 ORTHO05D001352 1.6e-22 111.3 305 40.7
Medtr1g016760 Medicago truncatula HOM05D001443 ORTHO05D001352 2.0e-22 110.9 281 39.1
Nitab4.5_0001584g0060 Nicotiana tabacum HOM05D001443 ORTHO05D001352 3.5e-22 110.2 282 38.3
Gohir.D06G088400 Gossypium hirsutum HOM05D001443 ORTHO05D001352 4.5e-22 109.8 287 38.0
Gorai.010G102100 Gossypium raimondii HOM05D001443 ORTHO05D001352 4.5e-22 109.8 287 38.0
FAN15G3039 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.0e-21 108.6 282 39.7
Nn8g38919 Nelumbo nucifera HOM05D001443 ORTHO05D001352 3.8e-21 106.7 326 35.9
Ca_13179_v3 Cicer arietinum L. HOM05D001443 ORTHO05D001352 4.2e-20 103.2 287 36.2
QL11p052292 Quercus lobata HOM05D001443 ORTHO05D001352 1.6e-19 101.3 286 36.7
CANSAT25G0392 Cannabis sativa HOM05D001443 ORTHO05D001352 4.7e-19 99.8 190 42.6
MD08G1044200 Malus domestica HOM05D001443 ORTHO05D001352 4.7e-19 99.8 302 35.8
DCAR_004440 Daucus carota HOM05D001443 ORTHO05D001352 6.1e-19 99.4 297 38.7
Dinv23429 Davidia involucrata HOM05D001443 ORTHO05D001352 6.1e-19 99.4 242 39.7
PGSC0003DMG400002210 Solanum tuberosum HOM05D001443 ORTHO05D001352 3.0e-18 97.1 278 33.5
Nitab4.5_0009587g0010 Nicotiana tabacum HOM05D001443 ORTHO05D001352 1.3e-16 91.7 304 36.2
Hma1.2p1_0482F.1_g162680 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 3.7e-16 90.1 291 38.1
Hma1.2p1_1944F.1_g308600 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 3.7e-16 90.1 291 38.1
Actinidia18193 Actinidia chinensis HOM05D001443 ORTHO05D001352 6.3e-16 89.4 291 37.1
CAN.G208.76 Capsicum annuum HOM05D001443 ORTHO05D001352 4.1e-15 86.7 303 33.0
AUR62022055 Chenopodium quinoa HOM05D001443 ORTHO05D001352 4.1e-15 86.7 285 34.7
Oeu029405.1 Olea europaea HOM05D001443 ORTHO05D001352 5.4e-15 86.3 250 36.8
Sed0027567 Sechium edule HOM05D001443 ORTHO05D001352 1.2e-14 85.1 315 35.6
Aqoxy7G01266 Aquilegia oxysepala HOM05D001443 ORTHO05D001352 1.6e-14 84.7 334 30.8
GSVIVG01035354001 Vitis vinifera HOM05D001443 ORTHO05D001352 1.6e-14 84.7 119 47.1
Solyc08g065630.3 Solanum lycopersicum HOM05D002015 ORTHO05D001352 1.0e-13 82.0 261 33.7
PSO063G2194 Papaver somniferum HOM05D001443 ORTHO05D001352 5.0e-13 79.7 330 35.8
Oeu036343.1 Olea europaea HOM05D001443 ORTHO05D001352 8.6e-13 79.0 176 38.1
Cc08_g10400 Coffea canephora HOM05D001443 ORTHO05D001352 1.9e-12 77.8 294 31.6
vmacro00155 Vaccinium macrocarpon HOM05D001443 ORTHO05D001352 4.3e-12 76.6 309 33.3
Oeu018652.2 Olea europaea HOM05D001443 ORTHO05D001352 1.6e-11 74.7 229 35.4
Nitab4.5_0000738g0120 Nicotiana tabacum HOM05D001443 ORTHO05D001352 2.8e-11 73.9 279 35.1
Thhalv10001945m.g Eutrema salsugineum HOM05D001443 ORTHO05D001352 6.1e-11 72.8 247 35.6
Rhsim11G0045600 Rhododendron simsii HOM05D001443 ORTHO05D001352 8.0e-11 72.4 309 31.1
Sc09g0009730 Simmondsia chinensis HOM05D001443 ORTHO05D001352 1.8e-10 71.2 162 41.4
ECA233G0783 Erigeron canadensis HOM05D001443 ORTHO05D001352 2.3e-10 70.9 289 32.5
CSS0000793 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 8.9e-10 68.9 305 33.1
PSO832G3656 Papaver somniferum HOM05D001443 ORTHO05D001352 8.9e-10 68.9 316 33.9
PGR044G0673 Punica granatum HOM05D001443 ORTHO05D001352 8.9e-10 68.9 184 37.0
Oeu037328.1 Olea europaea HOM05D001443 ORTHO05D001352 2.2e-08 64.3 190 33.7
THA.LOC104804517 Tarenaya hassleriana HOM05D001443 ORTHO05D001352 2.9e-08 63.9 279 37.6
Atru.chr7.1037 Acer truncatum HOM05D001443 ORTHO05D001352 3.7e-08 63.5 213 36.6
TPR.G13013 Trifolium pratense HOM05D001443 ORTHO05D001352 4.9e-08 63.2 206 34.0
Ah.10g034480 Amaranthus hybridus HOM05D001443 ORTHO05D001352 1.1e-07 62.0 305 32.1
MBI01_g02268_MAGBIO Magnolia biondii HOM05D001443 ORTHO05D001352 1.1e-07 62.0 292 32.9
TAR624G0653 Trochodendron aralioides HOM05D001033 ORTHO05D002045 1.1e-07 62.0 315 32.1
AUR62009169 Chenopodium quinoa HOM05D001443 ORTHO05D001352 3.2e-07 60.5 268 32.5
PSO210G5804 Papaver somniferum HOM05D001443 ORTHO05D001352 7.8e-06 55.8 239 33.9


User provided reference genes

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