Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.2e-51 205.3 101 100.0
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 5.3e-45 184.1 101 88.1
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.0e-44 182.2 101 87.1
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.0e-43 179.9 97 90.7
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.2e-43 178.7 101 82.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 2.9e-43 178.3 101 82.2
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.9e-42 175.6 97 87.6
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 9.3e-42 173.3 101 89.1
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.2e-41 172.9 97 86.6
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 3.5e-41 171.4 101 84.2
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 3.9e-40 167.9 101 81.2
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.3e-39 164.9 101 84.2
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 3.3e-39 164.9 92 87.0
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.3e-39 164.5 101 83.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 7.4e-39 163.7 100 82.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 9.6e-39 163.3 101 79.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 9.6e-39 163.3 101 79.2
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 9.6e-39 163.3 92 84.8
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.6e-38 162.5 101 79.2
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 2.1e-38 162.2 101 81.2
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.8e-38 161.8 100 79.0
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 4.8e-38 161.0 102 79.4
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.1e-37 159.8 101 82.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.1e-37 159.8 100 77.0
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 101 82.2
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.8e-37 159.1 92 81.5
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 3.1e-37 158.3 97 78.4
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 3.1e-37 158.3 93 79.6
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 4.1e-37 157.9 94 80.9
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 5.3e-37 157.5 101 77.2
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 5.3e-37 157.5 100 78.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 5.3e-37 157.5 99 78.8
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.9e-37 157.1 94 79.8
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 9.0e-37 156.8 97 78.4
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 9.0e-37 156.8 103 74.8
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.2e-36 156.4 98 78.6
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 74.2
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 94 80.9
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.5e-36 156.0 94 80.9
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.6e-36 155.2 94 76.6
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.6e-36 155.2 91 81.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 4.5e-36 154.5 101 78.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 4.5e-36 154.5 92 77.2
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 7.6e-36 153.7 103 71.8
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.6e-36 153.7 103 71.8
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.6e-36 153.7 103 71.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.3e-35 152.9 99 77.8
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 2.9e-35 151.8 91 81.3
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.9e-35 151.8 90 80.0
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.9e-35 151.8 90 80.0
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.9e-35 151.8 90 80.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.9e-35 151.8 94 78.7
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 5.0e-35 151.0 92 79.3
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 5.0e-35 151.0 97 76.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 6.5e-35 150.6 96 76.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.5e-35 150.6 103 70.9
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 6.5e-35 150.6 105 73.3
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.1e-34 149.8 92 79.3
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 1.9e-34 149.1 91 80.2
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.9e-34 149.1 94 72.3
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 2.5e-34 148.7 101 70.3
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.5e-34 148.7 96 76.0
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 3.2e-34 148.3 100 75.0
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 7.2e-34 147.1 97 73.2
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 7.2e-34 147.1 88 78.4
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 7.2e-34 147.1 94 75.5
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.2e-33 146.4 96 76.0
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.6e-33 146.0 91 74.7
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.6e-33 146.0 92 78.3
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.1e-33 145.6 91 78.0
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.1e-33 145.6 96 75.0
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.7e-33 145.2 92 76.1
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.5e-33 144.8 92 75.0
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 3.5e-33 144.8 100 73.0
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 7.9e-33 143.7 88 76.1
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 7.9e-33 143.7 92 76.1
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.8e-32 142.5 91 74.7
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.8e-32 142.5 92 72.8
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 3.0e-32 141.7 128 64.1
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-32 141.0 92 71.7
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 5.1e-32 141.0 92 71.7
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 5.1e-32 141.0 92 71.7
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 5.1e-32 141.0 92 71.7
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-31 139.8 92 70.7
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.5e-31 139.4 102 68.6
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 2.5e-31 138.7 90 77.8
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 3.3e-31 138.3 92 76.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 3.3e-31 138.3 82 82.9
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 5.7e-31 137.5 97 72.2
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.6e-30 136.0 97 68.0
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.6e-30 136.0 82 75.6
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 6.3e-30 134.0 97 68.0
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 8.2e-30 133.7 97 68.0
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-29 132.9 97 67.0
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.4e-29 132.9 97 67.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 3.1e-29 131.7 97 67.0
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 4.1e-29 131.3 81 79.0
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 2.6e-28 128.6 82 74.4
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.0e-27 126.7 73 80.8
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 5.0e-27 124.4 92 65.2
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 5.0e-27 124.4 88 71.6
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 6.5e-27 124.0 85 70.6
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.4e-26 122.9 81 71.6
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 5.1e-24 114.4 81 70.4
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.5e-23 112.1 107 59.8
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 4.3e-23 111.3 64 82.8
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.0e-20 102.4 89 58.4
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.0e-19 100.1 83 62.7
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.3e-19 99.8 72 69.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 6.1e-17 90.9 98 50.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.4e-16 89.7 88 53.4
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.8e-14 82.0 109 45.9
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 4.1e-13 78.2 84 51.2
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.3e-11 73.2 66 59.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.2e-11 72.4 43 72.1
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 2.5e-10 68.9 63 54.0
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 7.2e-10 67.4 39 79.5
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.7e-09 64.7 38 71.1
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 7.5e-07 57.4 47 53.2


User provided reference genes

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