Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 2.6e-194 681.8 331 100.0
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 6.1e-167 590.9 331 87.6
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 8.9e-166 587.0 332 87.3
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 8.3e-148 527.3 340 77.1
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 2.5e-144 515.8 338 77.2
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.5e-144 515.8 337 76.6
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 4.7e-143 511.5 341 77.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.5e-141 506.5 333 76.9
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 2.4e-139 499.2 332 75.3
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 7.1e-139 497.7 332 75.0
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.3e-137 492.7 277 88.1
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.0e-137 492.3 331 74.3
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 9.6e-136 487.3 338 71.0
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 6.2e-135 484.6 338 71.0
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 6.2e-135 484.6 334 70.1
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 4.0e-134 481.9 338 70.4
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 5.8e-133 478.0 338 69.8
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 7.1e-131 471.1 343 68.8
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.2e-130 470.3 335 69.0
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.7e-129 466.5 341 67.4
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.3e-129 466.1 347 67.4
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 3.9e-129 465.3 335 68.1
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 8.7e-129 464.2 351 67.8
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 2.5e-128 462.6 338 68.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 9.6e-128 460.7 334 68.0
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 9.6e-128 460.7 338 67.8
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 2.1e-127 459.5 339 67.8
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 4.8e-127 458.4 334 67.7
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 5.3e-126 454.9 341 66.6
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 3.4e-125 452.2 348 64.4
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 9.9e-125 450.7 350 63.7
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.2e-124 449.5 336 66.4
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 2.9e-124 449.1 305 70.2
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 6.4e-124 448.0 331 66.8
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.9e-123 446.4 337 67.1
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 4.2e-123 445.3 296 73.3
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 4.2e-123 445.3 346 65.0
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 7.1e-123 444.5 337 65.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 6.0e-122 441.4 330 68.2
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.3e-121 439.5 336 65.2
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 8.7e-121 437.6 337 65.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.1e-120 437.2 355 64.8
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.9e-120 436.4 338 63.3
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 9.6e-120 434.1 297 68.7
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.8e-119 432.6 341 63.3
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 4.8e-119 431.8 358 61.5
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.1e-118 430.6 309 67.0
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.4e-118 430.3 334 63.5
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.4e-118 430.3 297 67.0
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.4e-118 430.3 339 64.0
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.8e-118 429.9 316 65.8
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.4e-118 429.5 344 62.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 4.0e-118 428.7 341 63.9
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 9.0e-118 427.6 333 64.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 9.0e-118 427.6 327 63.6
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.2e-117 427.2 337 62.9
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.2e-117 427.2 317 69.1
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.2e-117 427.2 362 61.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.4e-117 425.6 307 70.0
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.4e-117 425.6 312 65.4
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 4.5e-117 425.2 334 63.2
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.3e-116 423.7 341 62.8
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.7e-116 423.3 341 61.3
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 2.9e-116 422.5 334 62.9
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 3.8e-116 422.2 334 62.9
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 4.9e-116 421.8 352 61.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 6.4e-116 421.4 338 63.0
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 7.1e-115 417.9 328 61.6
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.2e-114 417.2 299 66.9
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.7e-114 416.0 308 66.9
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.6e-114 415.2 288 68.4
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.3e-113 413.7 285 67.7
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.5e-112 410.2 327 64.2
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.9e-112 409.8 341 60.7
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.1e-110 404.1 334 61.7
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.4e-110 403.7 302 65.6
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 2.4e-110 402.9 334 61.4
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 9.0e-110 401.0 345 59.7
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.0e-109 399.8 340 61.2
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-108 397.1 308 66.6
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.3e-108 397.1 350 59.7
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.7e-108 396.7 340 61.5
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.1e-107 394.0 337 61.7
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 4.2e-107 392.1 310 62.3
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.6e-106 390.2 338 61.5
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.6e-106 390.2 338 61.5
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 2.3e-105 386.3 282 66.3
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.9e-105 385.6 351 58.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.5e-104 383.6 305 63.6
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.5e-104 382.9 309 61.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 4.1e-102 375.6 303 59.1
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.5e-100 368.2 215 77.2
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 3.2e-99 365.9 265 66.8
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.8e-97 360.1 238 70.2
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 6.3e-95 351.7 265 61.5
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.1e-94 350.9 321 57.9
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.8e-94 350.1 232 69.4
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.1e-91 340.9 354 54.0
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 6.9e-86 321.6 327 49.8
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 5.5e-83 312.0 342 51.5
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.7e-82 309.7 244 66.0
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 5.0e-68 262.3 327 40.1
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 3.2e-67 259.6 325 42.8
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.2e-67 258.5 283 44.9
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.4e-64 249.6 278 43.9
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 7.5e-64 248.4 223 59.6
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.3e-63 247.7 222 59.9
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.2e-61 241.1 208 55.3
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 4.2e-59 232.6 227 55.5
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 7.2e-59 231.9 248 44.0
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.0e-57 226.5 310 42.3
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 3.5e-53 213.0 157 66.2
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.0e-49 199.9 304 37.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.7e-48 195.7 267 39.0
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.6e-34 151.0 170 51.2
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-31 141.4 147 57.8
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.4e-30 137.9 106 55.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 7.3e-19 99.0 146 43.2
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.8e-15 86.7 165 38.8
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 6.2e-10 69.3 41 73.2
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.1e-09 68.6 95 43.2
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.5e-08 64.7 35 77.1
Lj2g0012465 Lotus japonicus HOM05D006406 ORTHO05D007883 9.3e-06 55.5 40 60.0


User provided reference genes

Program Settings