Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G209200 Glycine max HOM05D008278 ORTHO05D009926 2.7e-25 118.6 99 100.0
Glyma.19G206602 Glycine max HOM05D008278 ORTHO05D009926 4.7e-14 81.3 107 66.4
Psat3g024600 Pisum sativum HOM05D008278 ORTHO05D009926 1.1e-13 80.1 40 82.5
Phvul.001G202500 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 4.0e-13 78.2 58 63.8
Lj1g0017232 Lotus japonicus HOM05D008278 ORTHO05D009926 9.9e-12 73.6 51 62.7
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 1.3e-11 73.2 39 74.4
COL.COLO4_08021 Corchorus olitorius HOM05D008278 ORTHO05D009926 2.2e-11 72.4 41 70.7
Cc01_g20290 Coffea canephora HOM05D008278 ORTHO05D009926 2.9e-11 72.0 45 64.4
CiPaw.08G100100 Carya illinoinensis HOM05D008278 ORTHO05D009926 8.3e-11 70.5 33 81.8
Gohir.A11G117700 Gossypium hirsutum HOM05D008278 ORTHO05D009926 1.1e-10 70.1 40 70.0
Gorai.007G131400 Gossypium raimondii HOM05D008278 ORTHO05D009926 1.1e-10 70.1 40 70.0
Medtr7g108080 Medicago truncatula HOM05D008278 ORTHO05D009926 1.1e-10 70.1 42 73.8
CiPaw.07G100700 Carya illinoinensis HOM05D008278 ORTHO05D009926 2.4e-10 68.9 47 63.8
Thecc.01G291200 Theobroma cacao HOM05D008278 ORTHO05D009926 2.4e-10 68.9 38 71.1
TWI59G0540 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 2.4e-10 68.9 35 71.4
Psat0s1883g0120 Pisum sativum HOM05D008278 ORTHO05D009926 3.2e-10 68.6 34 82.4
Gohir.D11G122600 Gossypium hirsutum HOM05D008278 ORTHO05D009926 4.1e-10 68.2 43 69.8
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 9.2e-10 67.0 34 73.5
Aqoxy5G00615 Aquilegia oxysepala HOM05D008278 ORTHO05D009926 1.2e-09 66.6 97 49.5
Hma1.2p1_0209F.1_g089030 Hydrangea macrophylla HOM05D008278 ORTHO05D009926 2.7e-09 65.5 47 61.7
TWI14G0577 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 3.5e-09 65.1 35 65.7
RcHm_v2.0_Chr6g0292641 Rosa chinensis HOM05D008278 ORTHO05D009926 2.3e-08 62.4 40 62.5
vmacro08204 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 5.1e-08 61.2 34 73.5
MD03G1276800 Malus domestica HOM05D008278 ORTHO05D009926 6.6e-08 60.8 49 57.1
PGR119G0374 Punica granatum HOM05D008278 ORTHO05D009926 6.6e-08 60.8 34 64.7
Sc24g0003970 Simmondsia chinensis HOM05D008278 ORTHO05D009926 8.6e-08 60.5 34 67.6
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 1.1e-07 60.1 31 71.0
QL12p024203 Quercus lobata HOM05D008278 ORTHO05D009926 2.5e-07 58.9 45 71.1
Prupe.8G253200 Prunus persica HOM05D008278 ORTHO05D009926 1.2e-06 56.6 34 67.6
Eucgr.H03768 Eucalyptus grandis HOM05D008278 ORTHO05D009926 2.1e-06 55.8 45 68.9
PGR015G0009 Punica granatum HOM05D008278 ORTHO05D009926 2.8e-06 55.5 30 70.0
Manes.01G214200 Manihot esculenta HOM05D008278 ORTHO05D009926 3.6e-06 55.1 34 67.6
Manes.03G191100 Manihot esculenta HOM05D008278 ORTHO05D009926 3.6e-06 55.1 34 70.6
CiPaw.02G086800 Carya illinoinensis HOM05D008278 ORTHO05D009926 4.7e-06 54.7 34 61.8
PSO170G0879 Papaver somniferum HOM05D008278 ORTHO05D009926 8.1e-06 53.9 35 60.0
Thecc.04G277500 Theobroma cacao HOM05D008278 ORTHO05D009926 8.1e-06 53.9 34 67.6


User provided reference genes

Program Settings