Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 1.1e-81 306.6 157 100.0
Glyma.19G198100 Glycine max HOM05D006872 ORTHO05D006261 6.5e-66 254.2 157 86.0
Ca_09043_v3 Cicer arietinum L. HOM05D006872 ORTHO05D006261 2.3e-31 139.4 158 57.6
Lj1g0011262 Lotus japonicus HOM05D006872 ORTHO05D006261 1.5e-30 136.7 158 55.1
Psat3g030200 Pisum sativum HOM05D006872 ORTHO05D006261 1.1e-25 120.6 158 53.2
Medtr7g105820 Medicago truncatula HOM05D006872 ORTHO05D006261 7.5e-22 107.8 157 52.9
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 6.3e-21 104.8 163 47.2
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 1.1e-20 104.0 163 47.2
Glyma.02G198900 Glycine max HOM05D006872 ORTHO05D006261 3.1e-20 102.4 133 51.1
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 1.2e-19 100.5 169 45.0
Lalb_Chr20g0111461 Lupinus albus HOM05D006872 ORTHO05D006261 1.6e-19 100.1 137 54.0
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 2.0e-19 99.8 163 46.0
VMungo0720G0028 Vigna mungo HOM05D006872 ORTHO05D006261 3.5e-19 99.0 111 54.1
CiPaw.09G018900 Carya illinoinensis HOM05D006872 ORTHO05D006261 4.5e-19 98.6 166 48.8
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 1.7e-18 96.7 163 44.2
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 3.8e-18 95.5 160 48.1
Sed0014477 Sechium edule HOM05D006872 ORTHO05D006261 3.8e-18 95.5 160 46.2
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 5.0e-18 95.1 152 51.3
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 5.0e-18 95.1 161 47.2
Ciclev10013044m.g Citrus clementina HOM05D006872 ORTHO05D006261 8.6e-18 94.4 129 55.0
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 8.6e-18 94.4 145 47.6
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.5e-17 93.6 159 48.4
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 1.5e-17 93.6 159 44.0
TPR.G23353 Trifolium pratense HOM05D006872 ORTHO05D006261 1.9e-17 93.2 148 52.0
ClCG10G018510 Citrullus lanatus HOM05D006872 ORTHO05D006261 2.5e-17 92.8 158 47.5
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 3.3e-17 92.4 143 50.3
Phvul.007G269600 Phaseolus vulgaris HOM05D006872 ORTHO05D006261 4.2e-17 92.0 108 53.7
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 5.5e-17 91.7 159 44.0
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 9.5e-17 90.9 161 47.2
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 2.1e-16 89.7 158 47.5
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 2.1e-16 89.7 177 41.8
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 3.6e-16 89.0 165 45.5
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 3.6e-16 89.0 152 46.1
Sed0018559 Sechium edule HOM05D006872 ORTHO05D006261 6.1e-16 88.2 135 49.6
Atru.chr8.1395 Acer truncatum HOM05D006872 ORTHO05D006261 8.0e-16 87.8 166 43.4
Duzib106G0826 Durio zibethinus HOM05D006872 ORTHO05D006261 8.0e-16 87.8 163 42.9
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 8.0e-16 87.8 128 50.0
QL07p037475 Quercus lobata HOM05D006872 ORTHO05D006261 1.0e-15 87.4 104 53.8
MELO3C024577.2 Cucumis melo HOM05D006872 ORTHO05D006261 1.4e-15 87.0 153 45.1
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 1.8e-15 86.7 161 40.4
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 1.8e-15 86.7 166 45.2
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.3e-15 86.3 155 44.5
TPR.G18391 Trifolium pratense HOM05D006872 ORTHO05D006261 5.2e-15 85.1 120 55.0
Cpa.g.sc104.60 Carica papaya HOM05D006872 ORTHO05D006261 6.8e-15 84.7 116 48.3
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 6.8e-15 84.7 118 55.9
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 1.2e-14 84.0 182 41.8
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.2e-14 84.0 159 44.7
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 2.0e-14 83.2 103 55.3
CsaV3_6G040990 Cucumis sativus L. HOM05D006872 ORTHO05D006261 4.4e-14 82.0 155 43.9
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 4.4e-14 82.0 106 51.9
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 5.7e-14 81.6 135 46.7
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 5.7e-14 81.6 135 46.7
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 9.8e-14 80.9 113 49.6
Lsat_1_v5_gn_2_55301 Lactuca sativa HOM05D006872 ORTHO05D006261 2.8e-13 79.3 112 51.8
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 3.7e-13 79.0 128 46.9
Glyma.10G078000 Glycine max HOM05D006872 ORTHO05D006261 4.9e-13 78.6 136 44.9
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 1.4e-12 77.0 182 40.1
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 1.4e-12 77.0 132 46.2
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 1.8e-12 76.6 132 46.2
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 4.1e-12 75.5 163 39.3
HanXRQChr15g0494731 Helianthus annuus HOM05D006872 ORTHO05D006261 5.4e-12 75.1 122 50.0
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 7.0e-12 74.7 179 39.7
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.0e-11 73.2 109 48.6
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 3.5e-11 72.4 138 43.5
Manes.09G048400 Manihot esculenta HOM05D006872 ORTHO05D006261 3.5e-11 72.4 163 39.9
Migut.L01821 Erythranthe guttata HOM05D006872 ORTHO05D006261 4.5e-11 72.0 111 48.6
PSO384G3916 Papaver somniferum HOM05D006872 ORTHO05D006261 5.9e-11 71.6 160 38.8
PSO339G3041 Papaver somniferum HOM05D006872 ORTHO05D006261 7.8e-11 71.2 162 39.5
THA.LOC104816611 Tarenaya hassleriana HOM05D006872 ORTHO05D006261 7.8e-11 71.2 134 44.0
MSTRG.26609 Avicennia marina HOM05D006872 ORTHO05D006261 1.7e-10 70.1 144 44.4
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 2.3e-10 69.7 63 61.9
Ah.08g210170 Amaranthus hybridus HOM05D006872 ORTHO05D006261 2.9e-10 69.3 152 40.1
Oeu009304.1 Olea europaea HOM05D006872 ORTHO05D006261 2.9e-10 69.3 113 44.2
BcaB01g05730 Brassica carinata HOM05D010494 ORTHO05D006261 3.8e-10 68.9 142 42.3
FAN09G3456 Fragaria x ananassa HOM05D006872 ORTHO05D006261 6.6e-10 68.2 106 45.3
C03p03070 Brassica napus HOM05D010494 ORTHO05D006261 1.1e-09 67.4 128 42.2
Carub.0005s1890 Capsella rubella HOM05D006872 ORTHO05D006261 1.1e-09 67.4 108 45.4
Hma1.2p1_1442F.1_g283790 Hydrangea macrophylla HOM05D006872 ORTHO05D006261 1.1e-09 67.4 160 45.0
SalBow6G0243 Salvia bowleyana HOM05D006872 ORTHO05D006261 1.5e-09 67.0 78 55.1
Sp5g09790 Schrenkiella parvula HOM05D006872 ORTHO05D006261 1.5e-09 67.0 89 48.3
Sc20g0006630 Simmondsia chinensis HOM05D006872 ORTHO05D006261 1.5e-09 67.0 85 54.1
ECA233G2821 Erigeron canadensis HOM05D001423 ORTHO05D001412 1.9e-09 66.6 81 53.1
Lsat_1_v5_gn_5_87380 Lactuca sativa HOM05D006872 ORTHO05D006261 1.9e-09 66.6 65 58.5
HanXRQChr13g0398221 Helianthus annuus HOM05D006872 ORTHO05D006261 3.3e-09 65.9 73 54.8
Medtr2g102560 Medicago truncatula HOM05D006872 ORTHO05D006261 3.3e-09 65.9 59 66.1
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 4.3e-09 65.5 179 36.3
SalBow5G3820 Salvia bowleyana HOM05D006872 ORTHO05D006261 5.6e-09 65.1 143 40.6
BraA03t09629Z Brassica rapa HOM05D010494 ORTHO05D006261 7.3e-09 64.7 151 39.7
BcaB02g08564 Brassica carinata HOM05D006872 ORTHO05D006261 9.5e-09 64.3 106 48.1
BolC3t12855H Brassica oleracea HOM05D010494 ORTHO05D006261 9.5e-09 64.3 143 39.9
Thhalv10011026m.g Eutrema salsugineum HOM05D006872 ORTHO05D006261 1.2e-08 63.9 112 42.9
AL5G33230 Arabidopsis lyrata HOM05D006872 ORTHO05D006261 1.6e-08 63.5 105 45.7
CDE02G4309 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 1.6e-08 63.5 80 52.5
Medtr4g085050 Medicago truncatula HOM05D006872 ORTHO05D006261 1.6e-08 63.5 60 65.0
AT3G52520 Arabidopsis thaliana HOM05D006872 ORTHO05D006261 2.1e-08 63.2 107 43.9
EL10Ac7g16814 Beta vulgaris HOM05D006872 ORTHO05D006261 2.1e-08 63.2 126 39.7
A03p02670 Brassica napus HOM05D010494 ORTHO05D006261 2.8e-08 62.8 151 39.7
AUR62006268 Chenopodium quinoa HOM05D006872 ORTHO05D006261 3.6e-08 62.4 123 42.3
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 3.6e-08 62.4 100 46.0
ATR0772G099 Amborella trichopoda HOM05D006872 ORTHO05D006261 4.7e-08 62.0 135 39.3
CARHR162280 Cardamine hirsuta HOM05D006872 ORTHO05D006261 4.7e-08 62.0 83 49.4
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 4.7e-08 62.0 179 35.8
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 6.1e-08 61.6 72 45.8
A04p06870 Brassica napus HOM05D006872 ORTHO05D006261 8.0e-08 61.2 89 49.4
C04p40490 Brassica napus HOM05D006872 ORTHO05D006261 8.0e-08 61.2 89 49.4
BolC4t25629H Brassica oleracea HOM05D006872 ORTHO05D006261 8.0e-08 61.2 89 49.4
BraA04t16387Z Brassica rapa HOM05D006872 ORTHO05D006261 8.0e-08 61.2 89 49.4
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.0e-07 60.8 66 56.1
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.4e-07 60.5 83 42.2
AUR62037038 Chenopodium quinoa HOM05D006872 ORTHO05D006261 2.3e-07 59.7 118 43.2
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 3.0e-07 59.3 79 45.6
SHI12280 Sapria himalayana HOM05D006872 ORTHO05D006261 3.0e-07 59.3 103 40.8
BcaC02g09248 Brassica carinata HOM05D006872 ORTHO05D006261 4.0e-07 58.9 82 50.0
Thhalv10014914m.g Eutrema salsugineum HOM05D010494 ORTHO05D006261 8.9e-07 57.8 146 39.0
unitig_578.g16361 Utricularia gibba HOM05D006872 ORTHO05D006261 8.9e-07 57.8 143 38.5
Sp6g36570 Schrenkiella parvula HOM05D010494 ORTHO05D006261 1.2e-06 57.4 146 38.4
THA.LOC104799749 Tarenaya hassleriana HOM05D006872 ORTHO05D006261 1.2e-06 57.4 140 37.9
Nn4g22751 Nelumbo nucifera HOM05D006872 ORTHO05D006261 2.0e-06 56.6 97 46.4
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.6e-06 56.2 81 44.4
AL6G16320 Arabidopsis lyrata HOM05D010494 ORTHO05D006261 3.4e-06 55.8 125 39.2
Aa31sc52G100 Aethionema arabicum HOM05D010494 ORTHO05D006261 4.4e-06 55.5 145 35.9
CDE11G0740 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 4.4e-06 55.5 97 42.3
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 4.4e-06 55.5 83 45.8
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 5.8e-06 55.1 83 44.6
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 9.8e-06 54.3 98 42.9


User provided reference genes

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