Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 2.5e-37 158.3 81 100.0
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 2.5e-21 105.1 81 72.8
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 4.9e-17 90.9 58 79.3
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 1.2e-15 86.3 50 84.0
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 4.6e-15 84.3 58 72.4
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 1.0e-14 83.2 55 76.4
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 6.6e-14 80.5 50 82.0
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 4.3e-13 77.8 50 80.0
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.2e-12 76.3 50 76.0
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 1.2e-12 76.3 56 69.6
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 1.2e-12 76.3 50 70.0
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.6e-12 75.9 50 74.0
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 2.1e-12 75.5 56 67.9
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 2.8e-12 75.1 56 67.9
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 4.7e-12 74.3 46 76.1
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 6.2e-12 73.9 50 74.0
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 8.1e-12 73.6 50 74.0
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 8.1e-12 73.6 50 74.0
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 8.1e-12 73.6 49 73.5
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 1.1e-11 73.2 47 72.3
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.4e-11 72.8 52 65.4
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 1.8e-11 72.4 56 66.1
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 2.3e-11 72.0 50 74.0
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 3.1e-11 71.6 56 66.1
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 3.1e-11 71.6 56 62.5
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 3.1e-11 71.6 63 57.1
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 5.2e-11 70.9 56 64.3
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 1.5e-10 69.3 54 59.3
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 1.5e-10 69.3 55 63.6
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.5e-10 69.3 71 52.1
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 1.5e-10 69.3 50 70.0
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 2.0e-10 68.9 50 70.0
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 2.6e-10 68.6 51 64.7
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 4.4e-10 67.8 53 64.2
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 4.4e-10 67.8 56 62.5
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 7.5e-10 67.0 52 69.2
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 9.9e-10 66.6 50 68.0
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.7e-09 65.9 51 66.7
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 1.7e-09 65.9 52 67.3
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 1.7e-09 65.9 52 67.3
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 1.7e-09 65.9 50 70.0
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 3.7e-09 64.7 50 58.0
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 1.1e-08 63.2 61 54.1
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 1.4e-08 62.8 61 54.1
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 1.4e-08 62.8 52 65.4
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 5.4e-08 60.8 53 64.2
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 5.4e-08 60.8 53 64.2
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 5.4e-08 60.8 54 64.8
Mapoly0005s0168 Marchantia polymorpha HOM05D004031 ORTHO05D011186 8.6e-06 53.5 53 45.3


User provided reference genes

Program Settings