Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 3.0e-191 671.8 357 100.0
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 3.9e-175 618.2 357 93.3
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.5e-168 595.1 361 88.4
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.3e-167 592.4 357 88.8
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.4e-161 571.2 359 78.3
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.7e-159 566.2 357 77.0
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 6.6e-159 564.3 359 76.6
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 4.0e-156 555.1 357 78.4
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.6e-155 552.4 358 82.1
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 9.9e-155 550.4 360 81.4
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.2e-154 549.3 360 81.4
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.1e-152 542.7 357 75.6
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.0e-151 540.4 357 73.7
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 3.9e-151 538.5 357 73.7
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 5.1e-151 538.1 359 75.5
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.5e-150 536.6 357 79.3
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 3.3e-150 535.4 358 77.4
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 4.3e-150 535.0 357 72.3
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 7.4e-150 534.3 357 75.1
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 9.6e-150 533.9 357 73.4
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 1.3e-149 533.5 357 78.4
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.6e-149 533.1 357 70.9
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 2.1e-149 532.7 360 76.4
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.1e-149 532.7 365 69.3
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.6e-149 531.9 357 73.4
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 6.2e-149 531.2 357 73.9
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 6.2e-149 531.2 357 70.3
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 8.1e-149 530.8 357 72.0
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 8.1e-149 530.8 357 71.7
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.1e-149 530.8 357 71.7
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 8.1e-149 530.8 357 78.2
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.4e-148 530.0 357 70.0
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.1e-148 528.9 357 76.8
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 3.1e-148 528.9 357 76.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 6.9e-148 527.7 357 77.6
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 9.0e-148 527.3 357 76.5
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.2e-147 526.9 357 70.6
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-147 526.9 357 73.9
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.0e-147 526.2 357 70.3
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 2.0e-147 526.2 357 73.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 2.0e-147 526.2 357 77.6
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 2.6e-147 525.8 358 70.7
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.6e-147 525.8 357 70.3
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 3.4e-147 525.4 360 68.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.5e-147 525.0 357 69.2
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.6e-147 524.2 357 70.0
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 9.9e-147 523.9 358 70.7
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.7e-146 523.1 361 70.6
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 2.2e-146 522.7 358 70.1
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.9e-146 522.3 357 70.3
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 8.4e-146 520.8 357 69.7
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.1e-145 520.4 361 67.9
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.4e-145 520.0 357 69.7
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.4e-145 520.0 357 75.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.4e-145 520.0 357 68.6
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.9e-145 519.6 358 71.2
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 2.4e-145 519.2 361 67.3
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 4.2e-145 518.5 357 70.9
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 4.2e-145 518.5 357 68.6
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 7.1e-145 517.7 357 68.6
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 9.3e-145 517.3 357 70.0
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 9.3e-145 517.3 357 67.8
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.6e-144 516.5 357 69.7
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.6e-144 516.5 368 68.5
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 2.1e-144 516.2 357 67.8
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 3.5e-144 515.4 357 68.1
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 3.5e-144 515.4 360 72.8
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.5e-144 515.4 357 68.1
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.5e-144 515.4 357 73.7
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 6.0e-144 514.6 360 67.2
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 6.0e-144 514.6 360 69.2
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 1.0e-143 513.8 357 74.5
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.0e-143 513.8 357 68.6
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.8e-143 513.1 357 67.5
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.8e-143 513.1 357 67.8
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.8e-143 513.1 365 74.5
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.8e-143 513.1 357 73.1
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 3.9e-143 511.9 357 70.0
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 5.1e-143 511.5 357 69.5
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.5e-142 509.2 358 73.2
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 3.3e-142 508.8 357 67.8
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 9.6e-142 507.3 357 72.8
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.3e-141 506.9 357 70.9
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.6e-141 506.5 357 69.5
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 2.1e-141 506.1 357 70.3
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 3.7e-141 505.4 363 72.5
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.8e-141 505.0 357 66.9
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 6.2e-141 504.6 357 73.1
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 6.2e-141 504.6 357 66.4
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.4e-140 502.7 357 67.5
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 3.1e-140 502.3 357 66.1
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.1e-140 502.3 357 66.1
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 4.0e-140 501.9 357 71.4
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 4.0e-140 501.9 358 74.3
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 5.3e-140 501.5 357 73.4
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 5.3e-140 501.5 364 67.0
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.2e-139 500.4 357 72.5
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 2.0e-139 499.6 358 66.5
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 1.0e-138 497.3 357 68.3
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.7e-138 496.5 358 66.8
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.2e-138 496.1 351 71.5
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.4e-137 493.4 358 64.8
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 1.4e-137 493.4 357 71.1
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.5e-137 492.7 357 72.3
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 7.1e-137 491.1 358 66.8
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 3.5e-136 488.8 358 69.8
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 6.0e-136 488.0 400 60.5
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.1e-135 485.0 357 66.4
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 6.7e-135 484.6 358 64.2
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 6.7e-135 484.6 358 64.2
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.5e-134 483.4 358 63.4
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.3e-133 480.3 357 63.9
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 6.3e-133 478.0 359 70.2
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.2e-131 473.8 358 64.0
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.0e-131 473.0 365 64.9
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 4.5e-131 471.9 359 65.5
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 5.9e-131 471.5 358 62.8
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 3.8e-130 468.8 338 65.4
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.0e-130 468.4 356 64.6
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 8.5e-130 467.6 364 61.5
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 3.9e-127 458.8 358 61.5
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 4.3e-126 455.3 357 62.2
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.8e-124 449.9 361 58.4
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.0e-123 446.4 360 59.2
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 1.0e-122 444.1 342 62.0
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.7e-122 443.4 357 59.7
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.0e-122 441.8 360 58.9
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.9e-121 439.9 309 76.4
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 7.2e-121 438.0 357 57.1
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 8.8e-119 431.0 357 57.7
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.0e-118 429.9 300 74.0
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.6e-118 429.5 292 72.3
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.5e-115 420.2 300 70.3
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 7.2e-105 384.8 358 59.2
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.8e-103 380.2 328 60.4
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 9.7e-102 374.4 280 71.1
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.2e-98 363.2 359 53.2
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.4e-78 296.2 214 70.6
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 8.0e-72 275.0 357 43.7
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.2e-67 261.2 274 51.8
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 3.5e-67 259.6 248 57.3
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 3.6e-64 249.6 355 38.9
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-63 247.7 156 71.2
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.1e-60 235.3 176 69.9
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 9.2e-60 235.0 356 41.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.2e-54 218.0 115 88.7
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.9e-53 213.4 126 80.2
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 4.9e-53 212.6 127 78.0
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 8.7e-42 175.3 137 81.0
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.5e-38 162.9 85 82.4
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.6e-38 162.2 85 81.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.9e-38 161.8 85 81.2
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.6e-35 154.5 85 77.6
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 5.8e-30 136.0 161 46.0
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 1.4e-28 131.3 192 42.7
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 1.9e-28 131.0 138 49.3
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.1e-28 129.0 106 64.2
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-23 114.0 58 93.1
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 6.5e-21 105.9 206 38.3
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-20 104.8 59 83.1
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-20 104.8 63 77.8
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-20 104.8 59 83.1
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-19 101.7 59 76.3
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.3e-18 98.2 60 76.7
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 3.0e-18 97.1 75 56.0
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.9e-17 94.4 76 64.5
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.5e-17 94.0 55 80.0
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.5e-17 94.0 143 34.3
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 3.7e-16 90.1 64 65.6
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-15 88.2 40 85.0
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.9e-14 82.8 67 59.7
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.1e-12 78.6 149 29.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 2.5e-12 77.4 49 69.4
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 2.7e-11 73.9 71 47.9
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 3.9e-10 70.1 87 46.0
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 5.1e-10 69.7 83 41.0
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 4.3e-09 66.6 117 47.9
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.7e-08 64.7 50 58.0
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 5.3e-07 59.7 175 27.4
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 6.9e-07 59.3 158 27.2
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 6.9e-07 59.3 66 42.4


User provided reference genes

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