Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G125300 Glycine max HOM05D004624 ORTHO05D005357 4.9e-17 90.1 48 100.0
Aqoxy3G00212 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 1.2e-07 58.9 35 85.7
Ciclev10010500m.g Citrus clementina HOM05D004624 ORTHO05D005357 2.1e-07 58.2 35 82.9
CSS0035187 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Cpa.g.sc116.84 Carica papaya HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
COL.COLO4_05868 Corchorus olitorius HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Duzib205G0906 Durio zibethinus HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Glyma.01G100100 Glycine max HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Glyma.03G068900 Glycine max HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Gohir.D07G118600 Gossypium hirsutum HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Gorai.001G127500 Gossypium raimondii HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Gorai.008G288400 Gossypium raimondii HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Lalb_Chr19g0128161 Lupinus albus HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
PGR142G2854 Punica granatum HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
QL07p012089 Quercus lobata HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
vmacro08998 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 2.7e-07 57.8 35 82.9
Medtr2g008230 Medicago truncatula HOM05D004624 ORTHO05D005357 6.0e-07 56.6 35 80.0
Medtr4g124060 Medicago truncatula HOM05D004624 ORTHO05D005357 6.0e-07 56.6 35 80.0
Nn7g37680 Nelumbo nucifera HOM05D004624 ORTHO05D005357 6.0e-07 56.6 35 80.0
Psat0s1206g0080 Pisum sativum HOM05D004624 ORTHO05D005357 6.0e-07 56.6 35 80.0
CSS0023921 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 80.0
CSS0026932 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 80.0
Cfa019982 Carpinus fangiana HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 77.1
Haze_20251 Corylus avellana HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 77.1
Gohir.A07G114500 Gossypium hirsutum HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 80.0
Gohir.D12G268300 Gossypium hirsutum HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 80.0
Lj1g0004051 Lotus japonicus HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 80.0
Lalb_Chr19g0128151 Lupinus albus HOM05D004624 ORTHO05D005357 7.9e-07 56.2 35 80.0
Phvul.001G120800 Phaseolus vulgaris HOM05D004624 ORTHO05D005357 1.0e-06 55.8 35 80.0
TPR.G12609 Trifolium pratense HOM05D004624 ORTHO05D005357 1.0e-06 55.8 35 77.1
TAR633G0121 Trochodendron aralioides HOM05D004624 ORTHO05D005357 1.0e-06 55.8 37 75.7
vmacro17426 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 1.0e-06 55.8 35 80.0
CAN.G732.25 Capsicum annuum HOM05D004624 ORTHO05D005357 1.3e-06 55.5 37 75.7
Haze_02997 Corylus avellana HOM05D004624 ORTHO05D005357 1.3e-06 55.5 35 77.1
Hma1.2p1_0223F.1_g094210 Hydrangea macrophylla HOM05D004624 ORTHO05D005357 1.3e-06 55.5 35 77.1
Lj4g0019310 Lotus japonicus HOM05D004624 ORTHO05D005357 1.3e-06 55.5 35 80.0
Thecc.03G049000 Theobroma cacao HOM05D004624 ORTHO05D005357 1.3e-06 55.5 35 80.0
Ca_07684_v3 Cicer arietinum L. HOM05D004624 ORTHO05D005357 1.8e-06 55.1 35 77.1
Cc03_g11260 Coffea canephora HOM05D004624 ORTHO05D005357 1.8e-06 55.1 35 77.1
Rhsim13G0121200 Rhododendron simsii HOM05D004624 ORTHO05D005357 1.8e-06 55.1 35 77.1
Atru.chr12.1276 Acer truncatum HOM05D004624 ORTHO05D005357 2.3e-06 54.7 35 80.0
ClCG11G007400 Citrullus lanatus HOM05D004624 ORTHO05D005357 2.3e-06 54.7 35 74.3
Eucgr.K01650 Eucalyptus grandis HOM05D004624 ORTHO05D005357 2.3e-06 54.7 35 80.0
Sopen03g028160 Solanum pennellii HOM05D004624 ORTHO05D005357 2.3e-06 54.7 37 73.0
PGSC0003DMG400026480 Solanum tuberosum HOM05D004624 ORTHO05D005357 2.3e-06 54.7 37 73.0
GSVIVG01025772001 Vitis vinifera HOM05D004624 ORTHO05D005357 2.3e-06 54.7 35 77.1
CiPaw.10G042300 Carya illinoinensis HOM05D004624 ORTHO05D005357 3.0e-06 54.3 35 74.3
Nitab4.5_0000021g0900 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.0e-06 54.3 37 73.0
Peaxi162Scf00516g00035 Petunia axillaris HOM05D004624 ORTHO05D005357 3.0e-06 54.3 37 73.0
Sabra16G0036900 Salix brachista HOM05D004624 ORTHO05D005357 3.0e-06 54.3 35 74.3
Sabra16G0054100 Salix brachista HOM05D004624 ORTHO05D005357 3.0e-06 54.3 35 74.3
Dinv15634 Davidia involucrata HOM05D004624 ORTHO05D005357 3.9e-06 53.9 35 80.0
TPR.G16719 Trifolium pratense HOM05D004624 ORTHO05D005357 3.9e-06 53.9 35 74.3
arahy.Tifrunner.gnm1.ann1.Q8D3CZ Arachis hypogaea HOM05D004624 ORTHO05D005357 5.1e-06 53.5 35 77.1
arahy.Tifrunner.gnm1.ann1.QE2DSJ Arachis hypogaea HOM05D004624 ORTHO05D005357 5.1e-06 53.5 35 77.1
Sed0025002 Sechium edule HOM05D004624 ORTHO05D005357 5.1e-06 53.5 35 74.3
Sopen06g029060 Solanum pennellii HOM05D004624 ORTHO05D005357 5.1e-06 53.5 35 74.3
CAN.G65.122 Capsicum annuum HOM05D004624 ORTHO05D005357 6.7e-06 53.1 35 74.3
DCAR_020589 Daucus carota HOM05D004624 ORTHO05D005357 8.7e-06 52.8 35 77.1
DCAR_028787 Daucus carota HOM05D004624 ORTHO05D005357 8.7e-06 52.8 35 77.1
Manes.15G024800 Manihot esculenta HOM05D004624 ORTHO05D005357 8.7e-06 52.8 35 71.4
Potri.016G034200 Populus trichocarpa HOM05D004624 ORTHO05D005357 8.7e-06 52.8 35 71.4
Sabra06G0024000 Salix brachista HOM05D004624 ORTHO05D005357 8.7e-06 52.8 35 71.4


User provided reference genes

Program Settings