Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 4.2e-165 584.7 316 100.0
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.9e-104 383.3 324 71.0
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 3.5e-95 352.4 324 65.1
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.4e-91 340.5 324 63.0
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.8e-91 340.1 324 62.7
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 8.9e-91 337.8 324 63.3
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 8.7e-86 321.2 326 61.3
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 3.8e-81 305.8 324 58.3
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 4.0e-75 285.8 340 52.4
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 3.9e-70 269.2 257 63.8
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 2.2e-65 253.4 324 50.3
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 1.3e-62 244.2 311 50.5
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 7.4e-61 238.4 339 46.0
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.7e-60 236.1 294 51.7
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 9.0e-59 231.5 298 49.0
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.2e-58 231.1 288 51.0
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 4.5e-58 229.2 320 46.2
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 7.6e-58 228.4 339 45.7
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.6e-58 228.4 324 46.3
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 4.2e-56 222.6 324 44.4
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 1.2e-55 221.1 339 42.8
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 4.6e-55 219.2 311 46.3
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.1e-55 218.8 311 46.3
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 6.1e-55 218.8 311 47.3
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.3e-54 217.6 302 46.4
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.0e-54 216.5 323 43.7
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 3.0e-54 216.5 324 43.2
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 1.1e-53 214.5 296 48.0
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.9e-53 213.8 291 47.4
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 5.7e-53 212.2 322 42.9
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 9.7e-53 211.5 311 46.3
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.6e-52 210.7 326 43.3
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.8e-52 209.9 300 44.7
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 3.7e-52 209.5 321 42.1
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 3.7e-52 209.5 301 44.5
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 6.3e-52 208.8 347 40.3
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 8.2e-52 208.4 291 46.4
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.4e-51 207.6 315 42.5
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 4.1e-51 206.1 337 40.7
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 4.1e-51 206.1 337 40.7
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 5.3e-51 205.7 301 44.5
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.2e-50 204.5 287 45.3
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 1.2e-50 204.5 349 39.3
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.5e-50 204.1 317 42.3
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 4.5e-50 202.6 311 42.8
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 5.9e-50 202.2 339 39.2
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 7.7e-50 201.8 294 45.2
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.3e-49 201.1 324 40.7
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 2.2e-49 200.3 334 41.0
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 5.0e-49 199.1 323 39.9
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 6.5e-49 198.7 300 42.7
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.4e-48 197.6 324 40.7
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 1.4e-48 197.6 320 40.6
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 5.5e-48 195.7 337 38.9
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 1.2e-47 194.5 348 39.1
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 3.6e-47 193.0 294 45.2
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 6.1e-47 192.2 292 42.5
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 6.1e-47 192.2 292 42.5
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 1.0e-46 191.4 323 40.9
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.0e-46 191.4 294 45.2
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.4e-46 191.0 303 41.9
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.5e-45 186.8 306 43.1
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.3e-45 186.0 336 38.1
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.4e-43 181.0 305 39.7
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.8e-43 180.6 322 39.1
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 1.1e-40 171.4 315 37.8
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.2e-40 169.5 277 41.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 7.2e-40 168.7 257 43.6
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.6e-39 167.5 275 42.9
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 1.4e-38 164.5 303 38.6
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 8.8e-38 161.8 337 35.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.5e-37 161.0 323 36.8
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.0e-37 160.6 292 39.0
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.4e-35 154.5 263 41.4
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 7.7e-34 148.7 231 42.9
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 8.5e-33 145.2 154 57.1
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 1.1e-32 144.8 223 45.3
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 3.2e-32 143.3 323 35.9
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.1e-29 134.8 251 37.5
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.1e-29 134.8 346 32.9
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.1e-27 126.7 249 36.1
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 3.5e-26 123.2 272 34.9
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 5.5e-24 115.9 204 41.7
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 2.2e-20 104.0 323 29.1
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.4e-19 101.3 323 27.6
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 1.2e-18 98.2 316 28.2
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 5.0e-17 92.8 246 30.5
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 4.0e-14 83.2 319 28.2
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 1.2e-13 81.6 104 45.2
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 6.3e-12 75.9 123 40.7
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.1e-11 73.2 130 42.3
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 6.6e-09 65.9 311 26.4
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 7.2e-08 62.4 74 45.9


User provided reference genes

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