Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 2.2e-95 352.4 197 100.0
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 3.6e-74 282.0 199 85.9
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 6.8e-73 277.7 198 84.8
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 2.5e-59 232.6 199 71.9
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 4.3e-51 205.3 200 65.5
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 7.1e-46 188.0 185 64.9
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.2e-45 187.2 120 89.2
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 1.3e-44 183.7 197 62.4
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 3.3e-43 179.1 193 59.6
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 2.8e-42 176.0 200 59.5
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 5.3e-41 171.8 204 59.3
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 5.5e-38 161.8 198 58.6
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.5e-32 143.7 176 55.1
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.0e-32 143.3 148 60.8
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 2.6e-32 142.9 200 54.0
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 5.9e-32 141.7 148 60.1
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 5.9e-32 141.7 186 51.6
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 5.0e-31 138.7 199 52.3
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 1.9e-30 136.7 124 64.5
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 4.2e-30 135.6 128 63.3
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 2.1e-29 133.3 166 57.2
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 6.1e-29 131.7 147 60.5
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 6.1e-29 131.7 192 47.9
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 6.1e-29 131.7 165 55.2
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 7.9e-29 131.3 144 59.7
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 7.9e-29 131.3 178 55.1
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 1.0e-28 131.0 187 51.9
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.8e-28 130.2 193 49.2
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 1.8e-28 130.2 164 55.5
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 3.0e-28 129.4 188 48.9
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 3.0e-28 129.4 217 47.5
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 3.0e-28 129.4 198 50.0
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.9e-28 129.0 202 49.0
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 5.1e-28 128.6 186 50.0
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 8.8e-28 127.9 179 52.5
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 8.8e-28 127.9 136 62.5
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 8.8e-28 127.9 204 49.0
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 8.8e-28 127.9 208 49.5
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 1.1e-27 127.5 146 61.6
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 2.0e-27 126.7 215 48.8
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 2.5e-27 126.3 199 50.3
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 4.3e-27 125.6 172 50.6
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 7.4e-27 124.8 150 56.7
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 7.4e-27 124.8 175 49.1
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 9.7e-27 124.4 197 48.7
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 2.8e-26 122.9 185 52.4
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 4.8e-26 122.1 139 59.7
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 6.3e-26 121.7 163 51.5
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 8.2e-26 121.3 166 51.2
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 8.2e-26 121.3 170 50.6
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 1.1e-25 120.9 176 50.6
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.4e-25 120.6 201 46.8
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.4e-25 120.6 165 52.1
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 2.4e-25 119.8 165 52.1
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.4e-25 119.8 158 51.3
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 3.1e-25 119.4 203 47.8
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 6.9e-25 118.2 196 43.9
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.9e-25 118.2 144 59.0
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 6.9e-25 118.2 194 47.9
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 6.9e-25 118.2 190 49.5
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 6.9e-25 118.2 141 52.5
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 9.1e-25 117.9 199 44.7
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.5e-24 117.1 197 47.2
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 1.5e-24 117.1 116 61.2
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 1.5e-24 117.1 183 47.0
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 2.6e-24 116.3 94 73.4
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 2.6e-24 116.3 125 61.6
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 2.6e-24 116.3 166 50.0
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 4.5e-24 115.5 124 56.5
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 5.9e-24 115.2 166 53.6
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 7.7e-24 114.8 158 52.5
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 1.0e-23 114.4 124 55.6
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 2.2e-23 113.2 199 48.2
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.2e-23 113.2 143 54.5
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 2.2e-23 113.2 166 51.2
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 3.8e-23 112.5 138 55.1
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 6.5e-23 111.7 165 50.9
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 1.4e-22 110.5 126 56.3
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 2.5e-22 109.8 140 52.1
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 7.2e-22 108.2 185 44.9
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.6e-21 107.1 137 56.2
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 2.7e-21 106.3 160 50.6
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 3.6e-21 105.9 194 45.9
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 6.1e-21 105.1 191 45.5
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 6.1e-21 105.1 166 47.0
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 7.9e-21 104.8 198 44.9
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 7.9e-21 104.8 158 49.4
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.0e-20 104.4 194 42.8
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.4e-20 104.0 168 45.8
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.8e-20 103.6 194 42.8
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 2.3e-20 103.2 186 43.0
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 3.0e-20 102.8 194 42.3
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 3.0e-20 102.8 125 55.2
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 6.7e-20 101.7 191 44.0
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 8.8e-20 101.3 156 49.4
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 8.8e-20 101.3 193 44.6
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 2.0e-19 100.1 133 52.6
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 2.6e-19 99.8 206 40.8
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 3.3e-19 99.4 137 50.4
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 3.3e-19 99.4 97 56.7
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 4.4e-19 99.0 88 68.2
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.2e-18 96.7 138 51.4
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 6.3e-18 95.1 194 40.7
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 6.3e-18 95.1 147 45.6
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 3.1e-17 92.8 77 61.0
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 4.1e-17 92.4 106 53.8
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 5.3e-17 92.0 145 49.0
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 2.6e-16 89.7 145 45.5
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.5e-16 89.0 130 49.2
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 7.7e-16 88.2 175 44.6
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 2.2e-15 86.7 198 41.9
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 3.8e-15 85.9 130 51.5
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 5.0e-15 85.5 119 46.2
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 5.0e-15 85.5 146 43.2
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 1.5e-14 84.0 151 42.4
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.2e-14 82.8 76 56.6
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 5.5e-14 82.0 148 40.5
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 4.7e-13 79.0 67 65.7
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 1.1e-11 74.3 175 40.0
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.5e-11 73.9 85 52.9
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 2.2e-10 70.1 105 45.7
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 1.2e-08 64.3 125 39.2
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 2.0e-08 63.5 118 41.5
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 8.5e-07 58.2 140 35.0
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 7.2e-06 55.1 108 46.3
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.2e-06 55.1 108 46.3
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.4e-06 54.7 106 47.2
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.4e-06 54.7 106 47.2


User provided reference genes

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