Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 7.8e-46 186.8 97 100.0
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 3.9e-37 157.9 98 89.8
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 9.6e-28 126.7 98 76.5
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.6e-22 109.4 94 63.8
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 6.7e-21 104.0 97 61.9
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.5e-20 102.1 97 61.9
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 4.3e-20 101.3 90 63.3
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.3e-19 99.8 88 62.5
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 1.3e-19 99.8 95 62.1
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.4e-18 95.5 95 60.0
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 4.5e-17 91.3 94 59.6
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 7.6e-17 90.5 95 53.7
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 5.5e-15 84.3 145 42.8
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 8.7e-13 77.0 95 52.6
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 1.6e-11 72.8 88 51.1
Psat1g088640 Pisum sativum HOM05D007691 ORTHO05D008758 2.2e-11 72.4 91 44.0
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 4.8e-11 71.2 91 46.2
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 4.8e-11 71.2 85 49.4
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.1e-10 70.1 95 47.4
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 1.4e-10 69.7 86 48.8
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 1.4e-10 69.7 88 48.9
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 1.8e-10 69.3 95 47.4
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 1.8e-10 69.3 92 47.8
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 3.1e-10 68.6 87 46.0
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 4.1e-10 68.2 67 50.7
TPR.G33917 Trifolium pratense HOM05D007691 ORTHO05D008758 4.1e-10 68.2 92 46.7
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 6.9e-10 67.4 95 45.3
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 1.5e-09 66.2 95 46.3
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 1.5e-09 66.2 94 44.7
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.0e-09 65.9 95 44.2
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 3.4e-09 65.1 88 47.7
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 1.0e-08 63.5 92 43.5
Psat1g089160 Pisum sativum HOM05D007691 ORTHO05D008758 1.3e-08 63.2 87 44.8
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 2.2e-08 62.4 86 44.2
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 2.2e-08 62.4 92 45.7
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 2.9e-08 62.0 95 41.1
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 3.8e-08 61.6 96 42.7
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 6.5e-08 60.8 89 44.9
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 6.5e-08 60.8 94 41.5
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 6.5e-08 60.8 98 42.9
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 6.5e-08 60.8 92 42.4
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 6.5e-08 60.8 83 41.0
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 8.5e-08 60.5 94 42.6
Phvul.001G106200 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 8.5e-08 60.5 91 47.3
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 1.4e-07 59.7 96 43.8
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 1.4e-07 59.7 87 40.2
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 3.2e-07 58.5 90 45.6
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 3.2e-07 58.5 86 48.8
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 4.2e-07 58.2 86 43.0
Lalb_Chr24g0401091 Lupinus albus HOM05D007691 ORTHO05D008758 4.2e-07 58.2 91 42.9
Sabra19G0050800 Salix brachista HOM05D007691 ORTHO05D008758 5.5e-07 57.8 122 36.9
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 7.2e-07 57.4 88 44.3
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 1.2e-06 56.6 91 44.0
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 1.2e-06 56.6 86 47.7
Medtr7g086770 Medicago truncatula HOM05D007691 ORTHO05D008758 1.2e-06 56.6 92 44.6
Gohir.A08G220400 Gossypium hirsutum HOM05D007691 ORTHO05D008758 2.1e-06 55.8 95 43.2
TPR.G32543 Trifolium pratense HOM05D007691 ORTHO05D008758 2.1e-06 55.8 100 43.0
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 2.7e-06 55.5 93 44.1
QL07p017183 Quercus lobata HOM05D007691 ORTHO05D008758 3.6e-06 55.1 97 41.2
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 4.6e-06 54.7 93 43.0
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 6.1e-06 54.3 40 62.5
Lalb_Chr02g0157431 Lupinus albus HOM05D007691 ORTHO05D008758 6.1e-06 54.3 87 39.1
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 6.1e-06 54.3 101 43.6
Phvul.004G054100 Phaseolus vulgaris HOM05D017020 ORTHO05D016669 6.1e-06 54.3 93 38.7
arahy.Tifrunner.gnm1.ann1.N1UETT Arachis hypogaea HOM05D007691 ORTHO05D008758 7.9e-06 53.9 100 36.0
MBI19_g09311_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 7.9e-06 53.9 95 41.1


User provided reference genes

Program Settings