Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 2.5e-72 275.4 144 100.0
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.1e-39 166.0 170 61.2
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.3e-16 88.6 171 43.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 9.6e-16 87.4 172 44.8
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.1e-15 86.3 171 43.3
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 6.9e-14 81.3 182 39.0
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 3.4e-13 79.0 113 51.3
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 5.8e-13 78.2 80 56.2
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 5.8e-13 78.2 119 47.1
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 1.3e-12 77.0 179 40.2
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 4.9e-12 75.1 100 48.0
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 4.9e-12 75.1 178 38.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 6.4e-12 74.7 167 40.1
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 6.4e-12 74.7 166 39.2
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.4e-11 72.8 137 40.9
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 3.2e-11 72.4 181 38.1
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 7.1e-11 71.2 181 38.1
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 9.3e-11 70.9 163 41.1
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.6e-10 70.1 168 39.3
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.7e-10 69.3 164 37.2
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 2.7e-10 69.3 177 33.3
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.7e-10 69.3 164 37.8
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 3.5e-10 68.9 176 35.8
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 4.6e-10 68.6 186 34.9
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 7.9e-10 67.8 163 35.0
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.0e-09 67.4 162 37.7
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.3e-09 67.0 107 38.3
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 1.3e-09 67.0 173 36.4
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.3e-09 67.0 173 34.1
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.8e-09 66.6 154 37.0
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.8e-09 66.6 76 47.4
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 2.3e-09 66.2 119 42.0
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.0e-09 65.9 81 46.9
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 6.7e-09 64.7 170 32.9
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.7e-09 64.3 119 42.0
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.7e-09 64.3 119 42.0
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 3.3e-08 62.4 123 40.7
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 7.4e-08 61.2 169 34.9
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 7.4e-08 61.2 81 49.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 9.6e-08 60.8 190 35.8
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 9.6e-08 60.8 184 33.2
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 1.6e-07 60.1 129 38.8
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.6e-07 60.1 129 38.8
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.6e-07 60.1 129 38.8
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.6e-07 60.1 129 38.8
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 2.1e-07 59.7 175 33.1
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 8.1e-07 57.8 99 39.4
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 8.1e-07 57.8 74 47.3
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.1e-06 57.4 176 31.8
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.1e-06 57.4 182 34.1
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.4e-06 57.0 82 50.0
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.8e-06 56.6 153 34.0
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 3.1e-06 55.8 170 30.6
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 3.1e-06 55.8 85 37.6
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 5.3e-06 55.1 171 34.5
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 5.3e-06 55.1 189 32.8
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 9.0e-06 54.3 82 50.0


User provided reference genes

Program Settings