Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 3.6e-82 308.5 198 100.0
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 5.0e-55 218.4 196 80.1
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 1.3e-34 150.6 152 74.3
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 8.5e-23 111.3 88 59.1
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 1.6e-21 107.1 94 56.4
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 3.1e-17 92.8 97 50.5
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 2.0e-16 90.1 159 54.1
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 4.5e-16 89.0 95 42.1
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 5.0e-15 85.5 101 42.6
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 1.5e-14 84.0 97 47.4
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 1.5e-14 84.0 127 57.5
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 2.5e-14 83.2 152 52.0
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 3.2e-14 82.8 102 43.1
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 3.2e-14 82.8 83 50.6
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 4.2e-14 82.4 108 41.7
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 4.2e-14 82.4 100 43.0
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 4.2e-14 82.4 100 43.0
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 5.5e-14 82.0 103 43.7
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 9.4e-14 81.3 101 41.6
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 9.4e-14 81.3 101 40.6
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 9.4e-14 81.3 108 41.7
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 9.4e-14 81.3 89 46.1
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 9.4e-14 81.3 100 43.0
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 1.2e-13 80.9 102 43.1
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 1.2e-13 80.9 100 42.0
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 6.1e-13 78.6 166 51.8
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 6.1e-13 78.6 191 42.9
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 8.0e-13 78.2 84 46.4
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 8.0e-13 78.2 77 42.9
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 1.0e-12 77.8 93 44.1
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 1.8e-12 77.0 139 50.4
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 3.0e-12 76.3 97 43.3
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 8.8e-12 74.7 96 41.7
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 1.5e-11 73.9 117 39.3
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 3.4e-11 72.8 93 38.7
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 4.4e-11 72.4 103 37.9
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 5.7e-11 72.0 94 38.3
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 9.8e-11 71.2 75 52.0
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 1.3e-10 70.9 94 40.4
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 1.3e-10 70.9 151 51.7
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 2.8e-10 69.7 92 37.0
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 2.8e-10 69.7 100 38.0
TPR.G1175 Trifolium pratense HOM05D008051 ORTHO05D009905 4.9e-10 68.9 79 38.0
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 6.3e-10 68.6 52 55.8
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 8.3e-10 68.2 86 40.7
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 8.3e-10 68.2 94 37.2
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 1.1e-09 67.8 98 42.9
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 1.1e-09 67.8 95 40.0
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 3.1e-09 66.2 141 51.1
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 4.1e-09 65.9 50 58.0
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 4.1e-09 65.9 105 40.0
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 9.2e-09 64.7 103 35.9
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 9.2e-09 64.7 48 58.3
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 1.2e-08 64.3 95 38.9
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 1.6e-08 63.9 104 41.3
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 1.6e-08 63.9 130 51.5
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 2.0e-08 63.5 49 57.1
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 3.5e-08 62.8 101 38.6
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 4.5e-08 62.4 102 36.3
TPR.G1196 Trifolium pratense HOM05D008051 ORTHO05D009905 4.5e-08 62.4 92 38.0
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 5.9e-08 62.0 96 38.5
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 5.9e-08 62.0 145 50.3
MD11G1211300 Malus domestica HOM05D008051 ORTHO05D009905 5.9e-08 62.0 117 35.0
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 7.7e-08 61.6 102 36.3
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.0e-07 61.2 96 38.5
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 2.9e-07 59.7 61 42.6
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 2.9e-07 59.7 93 37.6
Cpa.g.sc12.259 Carica papaya HOM05D008051 ORTHO05D009905 5.0e-07 58.9 92 39.1
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 5.0e-07 58.9 48 54.2
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 1.5e-06 57.4 91 39.6
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 3.3e-06 56.2 51 51.0
Medtr8g442580 Medicago truncatula HOM05D008051 ORTHO05D009905 4.3e-06 55.8 59 39.0
Prupe.4G218600 Prunus persica HOM05D002014 ORTHO05D001958 5.6e-06 55.5 103 33.0
Prupe.4G218500 Prunus persica HOM05D002014 ORTHO05D001958 9.5e-06 54.7 103 31.1


User provided reference genes

Program Settings